Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SH598_RS05675 Genome accession   NZ_CP139086
Coordinates   1129790..1129981 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain YN-2A     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1124790..1134981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SH598_RS05645 (SH598_05645) argF 1125642..1126613 (+) 972 WP_039252015.1 ornithine carbamoyltransferase -
  SH598_RS05650 (SH598_05650) - 1126689..1126868 (+) 180 WP_003155070.1 YjzC family protein -
  SH598_RS05655 (SH598_05655) - 1126905..1127090 (-) 186 WP_003155069.1 YjzD family protein -
  SH598_RS05660 (SH598_05660) - 1127351..1128085 (+) 735 WP_015417203.1 hypothetical protein -
  SH598_RS05665 (SH598_05665) - 1128168..1128734 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  SH598_RS05670 (SH598_05670) med 1128824..1129777 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  SH598_RS05675 (SH598_05675) comZ 1129790..1129981 (+) 192 WP_003155061.1 ComZ family protein Regulator
  SH598_RS05680 (SH598_05680) - 1130010..1130228 (-) 219 WP_007409123.1 hypothetical protein -
  SH598_RS05685 (SH598_05685) - 1130396..1131334 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  SH598_RS05690 (SH598_05690) fabF 1131357..1132595 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  SH598_RS05695 (SH598_05695) - 1132682..1133470 (+) 789 Protein_1058 DUF2268 domain-containing protein -
  SH598_RS05700 (SH598_05700) - 1133644..1134630 (+) 987 WP_031378493.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=907149 SH598_RS05675 WP_003155061.1 1129790..1129981(+) (comZ) [Bacillus velezensis strain YN-2A]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=907149 SH598_RS05675 WP_003155061.1 1129790..1129981(+) (comZ) [Bacillus velezensis strain YN-2A]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794