Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SGQ80_RS05465 | Genome accession | NZ_CP138873 |
| Coordinates | 1140930..1141229 (+) | Length | 99 a.a. |
| NCBI ID | WP_217654599.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 174 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1135930..1146229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGQ80_RS05425 (SGQ80_05425) | - | 1135991..1136194 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| SGQ80_RS05430 (SGQ80_05430) | - | 1136191..1137177 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SGQ80_RS05435 (SGQ80_05435) | - | 1137177..1137506 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SGQ80_RS05440 (SGQ80_05440) | - | 1137503..1138126 (+) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| SGQ80_RS05445 (SGQ80_05445) | comGA | 1138178..1139152 (+) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SGQ80_RS05450 (SGQ80_05450) | comGB | 1139124..1140194 (+) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SGQ80_RS05455 (SGQ80_05455) | comGC | 1140208..1140519 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SGQ80_RS05460 (SGQ80_05460) | comGD | 1140497..1140943 (+) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SGQ80_RS05465 (SGQ80_05465) | comGE | 1140930..1141229 (+) | 300 | WP_217654599.1 | competence protein ComGE | Machinery gene |
| SGQ80_RS05470 (SGQ80_05470) | comGF | 1141147..1141644 (+) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SGQ80_RS05475 (SGQ80_05475) | - | 1141741..1141887 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| SGQ80_RS05480 (SGQ80_05480) | - | 1141877..1142401 (+) | 525 | WP_001015122.1 | shikimate kinase | - |
| SGQ80_RS05485 (SGQ80_05485) | gcvT | 1142560..1143651 (+) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SGQ80_RS05490 (SGQ80_05490) | gcvPA | 1143671..1145017 (+) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11107.23 Da Isoelectric Point: 9.9215
>NTDB_id=905431 SGQ80_RS05465 WP_217654599.1 1140930..1141229(+) (comGE) [Staphylococcus aureus strain 174]
MKSYKCKGTFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGTFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=905431 SGQ80_RS05465 WP_217654599.1 1140930..1141229(+) (comGE) [Staphylococcus aureus strain 174]
ATGAAAAGCTATAAGTGTAAAGGAACATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGAACATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |