Detailed information NTG0902407

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SE933_RS08270
• Genome accession: NZ_CP138370
• Coordinates: 1589918..1590760 (+)
• Length: 280 a.a.
• NCBI ID: WP_001015250.1
• Uniprot ID: X5JZS7
• Organism: Streptococcus agalactiae strain SagR40
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1584918..1595760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE933_RS08245 (SE933_08245)	-	1585212..1585760 (+)	549	WP_000136503.1	sugar O-acetyltransferase	-
SE933_RS08250 (SE933_08250)	-	1585999..1586961 (+)	963	WP_000735584.1	ABC transporter permease	-
SE933_RS08255 (SE933_08255)	-	1586958..1587932 (+)	975	WP_000588585.1	iron chelate uptake ABC transporter family permease subunit	-
SE933_RS08260 (SE933_08260)	-	1587929..1588690 (+)	762	WP_000614752.1	ABC transporter ATP-binding protein	-
SE933_RS08265 (SE933_08265)	-	1588752..1589780 (+)	1029	WP_000162771.1	siderophore ABC transporter substrate-binding protein	-
SE933_RS08270 (SE933_08270)	dprA	1589918..1590760 (+)	843	WP_001015250.1	DNA-processing protein DprA	Machinery gene
SE933_RS08275 (SE933_08275)	topA	1590855..1592974 (+)	2120	Protein_1554	type I DNA topoisomerase	-
SE933_RS08280 (SE933_08280)	-	1593111..1593812 (+)	702	WP_000120355.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31271.32 Da
• Isoelectric Point: 9.3800

>NTDB_id=902407 SE933_RS08270 WP_001015250.1 1589918..1590760(+) (dprA) [Streptococcus agalactiae strain SagR40]
MNHFELFKLKKAGLTNLNINNIINYLKKNSLTSLSVRNMAVVSKCKNPTFFIENYKQLDLKKLRQEFKKFPVLSILDSNY
PLELKEIYNPPVLLFYQGNIELLSKPKLAVVGARQASQIGCQSVKKIIKETNNQFVIVSGLARGIDTAAHVSALKNGGSS
IAVIGSGLDVYYPTENKKLQEYMSYNHLVLSEYFTGEQPLKFHFPERNRIIAGLCQGIVVAEAKMRSGSLITCERALEEG
REVFAIPGNIIDGKSDGCHHLIQEGAKCIISGKDILSEYQ

Nucleotide

• Length: 843 bp

>NTDB_id=902407 SE933_RS08270 WP_001015250.1 1589918..1590760(+) (dprA) [Streptococcus agalactiae strain SagR40]
ATGAATCATTTTGAACTATTTAAGCTTAAAAAAGCTGGATTAACAAATCTTAATATCAACAATATTATCAACTATCTCAA
AAAGAATAGTTTAACTTCTCTATCTGTTCGCAATATGGCCGTAGTATCAAAATGTAAAAATCCTACTTTCTTTATAGAAA
ATTATAAACAGCTAGACCTTAAAAAACTTCGACAAGAATTCAAAAAATTTCCAGTTCTATCGATTTTGGATTCTAACTAT
CCTTTAGAGTTAAAAGAAATATATAATCCACCCGTTCTACTTTTTTATCAGGGTAATATTGAACTTCTATCTAAACCTAA
ATTAGCTGTAGTGGGGGCAAGACAGGCATCTCAGATAGGTTGTCAGTCTGTTAAAAAGATTATCAAGGAGACTAACAATC
AATTTGTTATCGTAAGTGGTTTAGCGCGTGGCATTGATACAGCAGCACATGTTAGTGCTTTAAAAAATGGCGGCAGTAGT
ATAGCTGTTATCGGGAGTGGTTTAGATGTTTATTATCCAACGGAGAATAAGAAACTTCAAGAATATATGTCATATAATCA
TCTCGTATTATCAGAATATTTTACCGGAGAACAACCCTTGAAATTTCATTTCCCCGAACGTAACCGTATTATTGCAGGGC
TGTGTCAAGGTATTGTGGTTGCCGAAGCTAAGATGAGATCTGGAAGTTTAATTACCTGTGAAAGAGCATTAGAAGAGGGA
CGAGAAGTTTTTGCCATTCCCGGAAATATTATCGATGGCAAATCAGATGGATGCCACCATCTTATCCAAGAAGGAGCTAA
ATGCATTATTTCAGGAAAAGATATCCTTTCTGAATATCAGTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-63)

3D structure

• AlphaFold DB: X5JZS7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70.251	99.643	0.7
dprA/cilB/dalA	Streptococcus mitis SK321	62.5	100	0.625
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae D39	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae R6	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	61.786	100	0.618
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	61.429	100	0.614
dprA	Lactococcus lactis subsp. cremoris KW2	61.29	99.643	0.611
dprA	Latilactobacillus sakei subsp. sakei 23K	42.231	89.643	0.379
dprA	Haemophilus influenzae Rd KW20	37.132	97.143	0.361