Detailed information NTG0902062

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SAY89_RS13120
• Genome accession: NZ_CP138348
• Coordinates: 3087561..3088676 (-)
• Length: 371 a.a.
• NCBI ID: WP_099435874.1
• Uniprot ID: -
• Organism: Cyanobacterium aponinum AL20115
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3082561..3093676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAY89_RS13100 (SAY89_13100)	-	3083261..3083515 (+)	255	WP_015220757.1	DUF3146 family protein	-
SAY89_RS13105 (SAY89_13105)	-	3083648..3085849 (-)	2202	WP_155084457.1	type II and III secretion system protein	-
SAY89_RS13110 (SAY89_13110)	-	3085943..3086698 (-)	756	WP_320001179.1	type II and III secretion system protein	-
SAY89_RS13115 (SAY89_13115)	-	3086695..3087558 (-)	864	WP_099435875.1	PilN domain-containing protein	-
SAY89_RS13120 (SAY89_13120)	pilM	3087561..3088676 (-)	1116	WP_099435874.1	type IV pilus assembly protein PilM	Machinery gene
SAY89_RS13125 (SAY89_13125)	-	3088965..3090296 (+)	1332	WP_015220612.1	sugar ABC transporter substrate-binding protein	-
SAY89_RS13130 (SAY89_13130)	-	3090440..3090895 (-)	456	WP_320001180.1	hypothetical protein	-
SAY89_RS13135 (SAY89_13135)	nrtS	3090894..3091124 (+)	231	WP_015220610.1	nitrate/nitrite transporter NrtS	-
SAY89_RS13140 (SAY89_13140)	-	3091468..3092136 (+)	669	WP_190362193.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-
SAY89_RS13145 (SAY89_13145)	-	3092215..3093444 (-)	1230	WP_155084460.1	DUF4336 domain-containing protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41194.46 Da
• Isoelectric Point: 4.2942

>NTDB_id=902062 SAY89_RS13120 WP_099435874.1 3087561..3088676(-) (pilM) [Cyanobacterium aponinum AL20115]
MLSFLDNFMGGKTNGVGIEISPDKVTLAQISKKGQQYKLLKYYSLEVPEEIFEEGQIVDSPALAELIDQLVKEAKVKPKQ
IATAVPMKDAVMRIIPIPAELNDQELRDMVLNHEAALYLPYPREEVDIDYQKLGYFVDEDGIEKVQVLLVATRREVTDLY
LETFQQAGLKVSVLEINSFALIRTIKEQLKQFSSSEAVVLVDIEFDTTEIAIICEGVPQFTRTIPIGTYQMQTALAQAMN
LPTSKNTELLQEITIPNNPEQTTSASTTSSQTWINPGMDSLLRVLGELVDELRRSINFYLNQSGDVEVVQMLLSGPGAGL
AQIDEFFTKKLSLPTMQIDPISALSLSLKEDLSPMQRAGLGTVLGLGMRMS

Nucleotide

• Length: 1116 bp

>NTDB_id=902062 SAY89_RS13120 WP_099435874.1 3087561..3088676(-) (pilM) [Cyanobacterium aponinum AL20115]
ATGTTAAGTTTTTTAGACAACTTCATGGGGGGGAAAACCAACGGTGTCGGTATTGAAATCAGTCCCGATAAAGTCACCCT
TGCTCAAATTAGTAAAAAAGGTCAACAATACAAATTACTCAAGTACTATTCTTTAGAAGTGCCAGAAGAAATATTTGAGG
AAGGACAAATAGTTGATTCTCCCGCATTGGCTGAGTTGATTGACCAACTTGTAAAGGAGGCAAAGGTTAAACCAAAGCAA
ATTGCTACTGCCGTACCCATGAAAGATGCGGTTATGCGTATTATACCAATTCCTGCAGAATTAAATGATCAGGAATTAAG
AGACATGGTGCTTAACCATGAAGCAGCCTTATATCTACCTTATCCTAGAGAAGAAGTGGATATAGACTATCAAAAATTAG
GCTACTTTGTGGATGAGGATGGCATCGAAAAAGTACAAGTTTTGTTAGTTGCTACCAGAAGAGAAGTAACTGACTTATAC
CTAGAAACATTTCAACAGGCAGGATTGAAAGTAAGTGTTCTGGAAATCAATAGTTTTGCTTTAATTAGAACTATAAAAGA
ACAACTCAAACAATTTTCTTCTAGTGAGGCAGTGGTTTTAGTGGATATTGAGTTTGATACTACCGAAATTGCCATTATCT
GTGAAGGTGTACCCCAATTTACCCGCACAATCCCCATTGGCACATATCAAATGCAAACAGCCTTGGCTCAAGCAATGAAT
TTGCCCACTTCCAAAAACACAGAACTATTGCAGGAAATTACTATTCCCAATAATCCAGAACAAACCACCAGCGCTAGTAC
CACTAGCAGTCAAACTTGGATAAACCCCGGCATGGATTCTTTATTAAGGGTTTTAGGTGAATTAGTGGATGAGTTGCGTC
GTTCTATCAATTTCTATCTCAATCAGAGTGGAGATGTGGAAGTAGTGCAGATGCTTTTATCTGGGCCGGGGGCGGGTTTG
GCACAAATTGATGAGTTTTTTACTAAAAAATTAAGTTTACCAACGATGCAAATTGACCCTATTTCGGCTTTATCTCTGAG
CTTGAAAGAGGATTTATCACCGATGCAAAGGGCTGGATTGGGTACTGTACTTGGTTTAGGAATGAGGATGAGCTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.405	99.73	0.652