Detailed information NTG0901151

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: SBO70_RS02140
• Genome accession: NZ_CP137890
• Coordinates: 449897..451045 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GJJK74
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 444897..456045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SBO70_RS02120 (SBO70_02120)	-	445305..445988 (-)	684	WP_015416808.1	ABC transporter ATP-binding protein	-
SBO70_RS02125 (SBO70_02125)	-	446003..447439 (-)	1437	WP_015416809.1	ABC transporter permease	-
SBO70_RS02130 (SBO70_02130)	-	447652..448335 (+)	684	WP_007410267.1	response regulator transcription factor	-
SBO70_RS02135 (SBO70_02135)	-	448322..449755 (+)	1434	WP_162303988.1	HAMP domain-containing sensor histidine kinase	-
SBO70_RS02140 (SBO70_02140)	rapC	449897..451045 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
SBO70_RS02145 (SBO70_02145)	phrC	451029..451148 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
SBO70_RS02150 (SBO70_02150)	-	451297..451407 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
SBO70_RS02155 (SBO70_02155)	-	451487..452851 (-)	1365	WP_042634827.1	aspartate kinase	-
SBO70_RS02160 (SBO70_02160)	ceuB	453265..454218 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
SBO70_RS02165 (SBO70_02165)	-	454208..455155 (+)	948	WP_040238557.1	iron chelate uptake ABC transporter family permease subunit	-
SBO70_RS02170 (SBO70_02170)	-	455149..455907 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=901151 SBO70_RS02140 WP_007410270.1 449897..451045(+) (rapC) [Bacillus velezensis strain GJJK74]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=901151 SBO70_RS02140 WP_007410270.1 449897..451045(+) (rapC) [Bacillus velezensis strain GJJK74]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568