Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ABD426_RS00680 | Genome accession | NZ_CP155739 |
| Coordinates | 104251..104535 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes strain 997/08 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99251..109535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABD426_RS00655 (ABD426_00645) | - | 101197..101562 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| ABD426_RS00660 (ABD426_00650) | comGA | 101655..102593 (+) | 939 | WP_023612548.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABD426_RS00665 (ABD426_00655) | comGB | 102529..103563 (+) | 1035 | WP_229363300.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABD426_RS00670 (ABD426_00660) | comGC | 103565..103891 (+) | 327 | WP_032465607.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABD426_RS00675 (ABD426_00665) | comGD | 103866..104294 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABD426_RS00680 (ABD426_00670) | comGE | 104251..104535 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABD426_RS00685 (ABD426_00675) | comGF | 104528..104962 (+) | 435 | WP_023612536.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABD426_RS00690 (ABD426_00680) | comGG | 104946..105272 (+) | 327 | WP_002992739.1 | competence type IV pilus minor pilin ComGG | - |
| ABD426_RS00695 (ABD426_00685) | comGH | 105370..106323 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABD426_RS00700 (ABD426_00690) | - | 106382..107578 (+) | 1197 | WP_023612537.1 | acetate kinase | - |
| ABD426_RS00705 (ABD426_00695) | - | 107765..108073 (+) | 309 | WP_032465606.1 | hypothetical protein | - |
| ABD426_RS00710 (ABD426_00700) | proC | 108156..108926 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=898490 ABD426_RS00680 WP_002987779.1 104251..104535(+) (comGE) [Streptococcus pyogenes strain 997/08]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=898490 ABD426_RS00680 WP_002987779.1 104251..104535(+) (comGE) [Streptococcus pyogenes strain 997/08]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |