Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   R4707_RS10440 Genome accession   NZ_CP137113
Coordinates   1990045..1990695 (+) Length   216 a.a.
NCBI ID   WP_000387330.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain ZGX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1985045..1995695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4707_RS10410 pyrH 1985769..1986506 (+) 738 WP_000002997.1 UMP kinase -
  R4707_RS10415 frr 1986515..1987072 (+) 558 WP_000024409.1 ribosome recycling factor -
  R4707_RS10420 cvfB 1987132..1987986 (+) 855 WP_001095445.1 RNA-binding virulence regulatory protein CvfB -
  R4707_RS10425 - 1987995..1988210 (+) 216 WP_001232085.1 YozE family protein -
  R4707_RS10430 - 1988296..1989300 (+) 1005 WP_000658177.1 PhoH family protein -
  R4707_RS10435 - 1989408..1989977 (+) 570 WP_000443770.1 GNAT family N-acetyltransferase -
  R4707_RS10440 comEA/celA/cilE 1990045..1990695 (+) 651 WP_000387330.1 ComEA family DNA-binding protein Machinery gene
  R4707_RS10445 comEC/celB 1990679..1992919 (+) 2241 WP_050103505.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  R4707_RS10450 - 1993098..1993286 (+) 189 WP_001812421.1 hypothetical protein -
  R4707_RS10455 - 1993319..1993906 (+) 588 WP_000939895.1 ATP-binding cassette domain-containing protein -
  R4707_RS10460 - 1993910..1995094 (+) 1185 WP_016398520.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23229.65 Da        Isoelectric Point: 5.5171

>NTDB_id=896141 R4707_RS10440 WP_000387330.1 1990045..1990695(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain ZGX]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=896141 R4707_RS10440 WP_000387330.1 1990045..1990695(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain ZGX]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.