Detailed information NTG0895565

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: R4702_RS06475
• Genome accession: NZ_CP137106
• Coordinates: 1279470..1279796 (+)
• Length: 108 a.a.
• NCBI ID: WP_000738632.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16P4028
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1274470..1284796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4702_RS06450	nagA	1274599..1275750 (+)	1152	WP_001134457.1	N-acetylglucosamine-6-phosphate deacetylase	-
R4702_RS06455	-	1275913..1276971 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
R4702_RS06460	-	1277122..1277487 (+)	366	WP_000286415.1	DUF1033 family protein	-
R4702_RS06465	comGA/cglA/cilD	1277563..1278504 (+)	942	WP_024478452.1	competence type IV pilus ATPase ComGA	Machinery gene
R4702_RS06470	comGB/cglB	1278452..1279468 (+)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
R4702_RS06475	comGC/cglC	1279470..1279796 (+)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
R4702_RS06480	comGD/cglD	1279789..1280193 (+)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4702_RS06485	comGE/cglE	1280156..1280458 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4702_RS06490	comGF/cglF	1280421..1280882 (+)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4702_RS06495	comGG/cglG	1280860..1281273 (+)	414	WP_000265631.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4702_RS06500	-	1281410..1282004 (+)	595	Protein_1274	class I SAM-dependent methyltransferase	-
R4702_RS06505	comYH	1282065..1283018 (+)	954	WP_000345100.1	class I SAM-dependent methyltransferase	Machinery gene
R4702_RS06510	-	1283069..1284259 (+)	1191	WP_000167766.1	acetate kinase	-
R4702_RS06515	-	1284260..1284391 (+)	132	WP_000768904.1	hypothetical protein	-
R4702_RS06520	rnpA	1284408..1284779 (+)	372	WP_317809495.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12180.34 Da
• Isoelectric Point: 10.0305

>NTDB_id=895565 R4702_RS06475 WP_000738632.1 1279470..1279796(+) (comGC/cglC) [Streptococcus pneumoniae strain 16P4028]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQVKAYKEYNDKNGGANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=895565 R4702_RS06475 WP_000738632.1 1279470..1279796(+) (comGC/cglC) [Streptococcus pneumoniae strain 16P4028]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGTTAAAGCTTATAAAGAATACAATGATAAAAATGGAGGAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae TIGR4	96.296	100	0.963
comGC/cglC	Streptococcus pneumoniae Rx1	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae D39	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae R6	95.37	100	0.954
comGC/cglC	Streptococcus mitis SK321	92.593	100	0.926
comGC/cglC	Streptococcus mitis NCTC 12261	91.919	91.667	0.843
comYC	Streptococcus gordonii str. Challis substr. CH1	66.99	95.37	0.639
comYC	Streptococcus mutans UA159	61.765	94.444	0.583
comYC	Streptococcus mutans UA140	61.765	94.444	0.583
comGC	Lactococcus lactis subsp. cremoris KW2	55.882	94.444	0.528
comYC	Streptococcus suis isolate S10	66.667	75	0.5
comGC	Staphylococcus aureus MW2	48.837	79.63	0.389
comGC	Staphylococcus aureus N315	48.837	79.63	0.389
comGC	Latilactobacillus sakei subsp. sakei 23K	45.349	79.63	0.361