Detailed information NTG0895498

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAHT64_RS06570
• Genome accession: NZ_CP155054
• Coordinates: 1294403..1295668 (-)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain R38
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1289403..1300668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT64_RS06545 (AAHT64_06545)	yrzK	1289643..1289813 (+)	171	WP_004399157.1	YrzK family protein	-
AAHT64_RS06550 (AAHT64_06550)	hisS	1290195..1291469 (+)	1275	WP_003229755.1	histidine--tRNA ligase	-
AAHT64_RS06555 (AAHT64_06555)	aspS	1291483..1293261 (+)	1779	WP_003229758.1	aspartate--tRNA ligase	-
AAHT64_RS06565 (AAHT64_06565)	tcdA	1293597..1294361 (+)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAHT64_RS06570 (AAHT64_06570)	rarA	1294403..1295668 (-)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
AAHT64_RS06575 (AAHT64_06575)	cymR	1295870..1296286 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAHT64_RS06580 (AAHT64_06580)	iscSA	1296305..1297447 (+)	1143	WP_003229769.1	cysteine desulfurase family protein	-
AAHT64_RS06585 (AAHT64_06585)	mnmA	1297475..1298590 (+)	1116	WP_032677111.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAHT64_RS06590 (AAHT64_06590)	yrrB	1298676..1299296 (+)	621	WP_237957762.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=895498 AAHT64_RS06570 WP_019712521.1 1294403..1295668(-) (rarA) [Bacillus subtilis subsp. subtilis strain R38]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=895498 AAHT64_RS06570 WP_019712521.1 1294403..1295668(-) (rarA) [Bacillus subtilis subsp. subtilis strain R38]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993