Detailed information NTG0895251

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAVB50_RS08580
• Genome accession: NZ_CP154923
• Coordinates: 1607925..1609190 (-)
• Length: 421 a.a.
• NCBI ID: WP_042976696.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2233
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1602925..1614190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB50_RS08555 (AAVB50_08550)	yrzK	1603165..1603335 (+)	171	WP_004399157.1	YrzK family protein	-
AAVB50_RS08560 (AAVB50_08555)	hisS	1603717..1604991 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
AAVB50_RS08565 (AAVB50_08560)	aspS	1605005..1606783 (+)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AAVB50_RS08575 (AAVB50_08570)	tcdA	1607119..1607883 (+)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAVB50_RS08580 (AAVB50_08575)	rarA	1607925..1609190 (-)	1266	WP_042976696.1	replication-associated recombination protein A	Machinery gene
AAVB50_RS08585 (AAVB50_08580)	cymR	1609393..1609809 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAVB50_RS08590 (AAVB50_08585)	iscSA	1609828..1610967 (+)	1140	WP_032722251.1	cysteine desulfurase family protein	-
AAVB50_RS08595 (AAVB50_08590)	mnmA	1610998..1612113 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAVB50_RS08600 (AAVB50_08595)	yrrB	1612199..1612819 (+)	621	WP_206697897.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.33 Da
• Isoelectric Point: 7.2043

>NTDB_id=895251 AAVB50_RS08580 WP_042976696.1 1607925..1609190(-) (rarA) [Bacillus subtilis strain FUA2233]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGVDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=895251 AAVB50_RS08580 WP_042976696.1 1607925..1609190(-) (rarA) [Bacillus subtilis strain FUA2233]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATCGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATCGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAGTCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995