Detailed information NTG0895103

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAVB74_RS08810
• Genome accession: NZ_CP154920
• Coordinates: 1672429..1673694 (-)
• Length: 421 a.a.
• NCBI ID: WP_042976696.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2232
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1667429..1678694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB74_RS08785 (AAVB74_08785)	yrzK	1667669..1667839 (+)	171	WP_004399157.1	YrzK family protein	-
AAVB74_RS08790 (AAVB74_08790)	hisS	1668221..1669495 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
AAVB74_RS08795 (AAVB74_08795)	aspS	1669509..1671287 (+)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AAVB74_RS08805 (AAVB74_08805)	tcdA	1671623..1672387 (+)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAVB74_RS08810 (AAVB74_08810)	rarA	1672429..1673694 (-)	1266	WP_042976696.1	replication-associated recombination protein A	Machinery gene
AAVB74_RS08815 (AAVB74_08815)	cymR	1673897..1674313 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAVB74_RS08820 (AAVB74_08820)	iscSA	1674332..1675471 (+)	1140	WP_032722251.1	cysteine desulfurase family protein	-
AAVB74_RS08825 (AAVB74_08825)	mnmA	1675502..1676617 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAVB74_RS08830 (AAVB74_08830)	yrrB	1676703..1677323 (+)	621	WP_206697897.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.33 Da
• Isoelectric Point: 7.2043

>NTDB_id=895103 AAVB74_RS08810 WP_042976696.1 1672429..1673694(-) (rarA) [Bacillus subtilis strain FUA2232]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGVDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=895103 AAVB74_RS08810 WP_042976696.1 1672429..1673694(-) (rarA) [Bacillus subtilis strain FUA2232]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATCGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATCGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAGTCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995