Detailed information NTG0894914

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAYR29_RS02060
• Genome accession: NZ_CP154918
• Coordinates: 362140..363405 (-)
• Length: 421 a.a.
• NCBI ID: WP_042976696.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2231
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 357140..368405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS02035 (AAYR29_02035)	yrzK	357380..357550 (+)	171	WP_004399157.1	YrzK family protein	-
AAYR29_RS02040 (AAYR29_02040)	hisS	357932..359206 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
AAYR29_RS02045 (AAYR29_02045)	aspS	359220..360998 (+)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AAYR29_RS02055 (AAYR29_02055)	tcdA	361334..362098 (+)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAYR29_RS02060 (AAYR29_02060)	rarA	362140..363405 (-)	1266	WP_042976696.1	replication-associated recombination protein A	Machinery gene
AAYR29_RS02065 (AAYR29_02065)	cymR	363608..364024 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAYR29_RS02070 (AAYR29_02070)	iscSA	364043..365182 (+)	1140	WP_032722251.1	cysteine desulfurase family protein	-
AAYR29_RS02075 (AAYR29_02075)	mnmA	365213..366328 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAYR29_RS02080 (AAYR29_02080)	yrrB	366414..367034 (+)	621	WP_206697897.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.33 Da
• Isoelectric Point: 7.2043

>NTDB_id=894914 AAYR29_RS02060 WP_042976696.1 362140..363405(-) (rarA) [Bacillus subtilis strain FUA2231]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGVDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=894914 AAYR29_RS02060 WP_042976696.1 362140..363405(-) (rarA) [Bacillus subtilis strain FUA2231]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATCGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATCGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAGTCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995