Detailed information NTG0894817

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAYR26_RS10875
• Genome accession: NZ_CP154901
• Coordinates: 2062939..2064204 (-)
• Length: 421 a.a.
• NCBI ID: WP_011198157.1
• Uniprot ID: Q65GR6
• Organism: Bacillus licheniformis strain FUA2146
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2057939..2069204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS10850 (AAYR26_10860)	-	2058068..2058232 (+)	165	WP_003183953.1	YrzK family protein	-
AAYR26_RS10855 (AAYR26_10865)	hisS	2058607..2059881 (+)	1275	WP_003183951.1	histidine--tRNA ligase	-
AAYR26_RS10860 (AAYR26_10870)	aspS	2059896..2061674 (+)	1779	WP_003183949.1	aspartate--tRNA ligase	-
AAYR26_RS10870 (AAYR26_10880)	-	2062094..2062858 (+)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAYR26_RS10875 (AAYR26_10885)	rarA	2062939..2064204 (-)	1266	WP_011198157.1	replication-associated recombination protein A	Machinery gene
AAYR26_RS10880 (AAYR26_10890)	cymR	2064779..2065195 (+)	417	WP_003183943.1	cysteine metabolism transcriptional regulator CymR	-
AAYR26_RS10885 (AAYR26_10895)	-	2065216..2066355 (+)	1140	WP_009327778.1	cysteine desulfurase family protein	-
AAYR26_RS10890 (AAYR26_10900)	mnmA	2066461..2067579 (+)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAYR26_RS10895 (AAYR26_10905)	-	2067673..2068323 (+)	651	WP_003183935.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46344.32 Da
• Isoelectric Point: 7.6230

>NTDB_id=894817 AAYR26_RS10875 WP_011198157.1 2062939..2064204(-) (rarA) [Bacillus licheniformis strain FUA2146]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKSFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=894817 AAYR26_RS10875 WP_011198157.1 2062939..2064204(-) (rarA) [Bacillus licheniformis strain FUA2146]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCCCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAAGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

3D structure

• AlphaFold DB: Q65GR6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.748	100	0.857