Detailed information NTG0894743

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AAVC70_RS19210
• Genome accession: NZ_CP154898
• Coordinates: 3497035..3499446 (+)
• Length: 803 a.a.
• NCBI ID: WP_061573883.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Fad 97
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3492035..3504446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC70_RS19185 (AAVC70_19185)	-	3493677..3494552 (+)	876	WP_013352211.1	YicC/YloC family endoribonuclease	-
AAVC70_RS19190 (AAVC70_19190)	remA	3494629..3494898 (+)	270	WP_003154355.1	extracellular matrix/biofilm regulator RemA	-
AAVC70_RS19195 (AAVC70_19195)	gmk	3494906..3495520 (+)	615	WP_013352212.1	guanylate kinase	-
AAVC70_RS19200 (AAVC70_19200)	rpoZ	3495524..3495727 (+)	204	WP_003154346.1	DNA-directed RNA polymerase subunit omega	-
AAVC70_RS19205 (AAVC70_19205)	coaBC	3495818..3497038 (+)	1221	WP_013352213.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
AAVC70_RS19210 (AAVC70_19210)	priA	3497035..3499446 (+)	2412	WP_061573883.1	primosomal protein N'	Machinery gene
AAVC70_RS19215 (AAVC70_19215)	def	3499470..3499952 (+)	483	WP_061573884.1	peptide deformylase	-
AAVC70_RS19220 (AAVC70_19220)	fmt	3499957..3500910 (+)	954	WP_061573885.1	methionyl-tRNA formyltransferase	-
AAVC70_RS19225 (AAVC70_19225)	rsmB	3500897..3502240 (+)	1344	WP_061573886.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
AAVC70_RS19230 (AAVC70_19230)	rlmN	3502244..3503335 (+)	1092	WP_013352218.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
AAVC70_RS19235 (AAVC70_19235)	-	3503341..3504102 (+)	762	WP_013352219.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-

Sequence

Protein

• Length: 803 a.a.
• Molecular weight: 90944.00 Da
• Isoelectric Point: 8.8944

>NTDB_id=894743 AAVC70_RS19210 WP_061573883.1 3497035..3499446(+) (priA) [Bacillus amyloliquefaciens strain Fad 97]
MNVAEVIVDVSSKNIDRPFDYRIPDHLRGMIEVGMRVIVPFGPRKLQGFVTGLKDSSELNGGQMKEVEKLLDLTPVLTEE
LMQLSSWLSDKTLSFKITALQAMLPAALKAKYEKELKVVDEEALTPDIRQLFRNQKSLLYSDITDERILSALQKFVRKGS
IDVTYKVAQKTNKKMIRMIEAGADKEELARHADSLTKQASKQLAVLTYFIDGGAKISAAELCQKTDSSSATLKTLLKKGL
LTDSFEEVYRDPYQDRMFKKTEPLSLTEEQQAAFEPIKKAVADHVHHVFLLHGVTGSGKTEIYLQSIEKVLAKGKEAIVL
VPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDEWRKIQRKEVKLVVGARSAIFAPFENLGMIIIDEEHESSYKQEE
MPRYHAKDVAIRRAEHHSCPVVLGSATPTLESFARAKKGVYELLPLKHRVNRQLMPDVSLVDMREELRNGNRSMFSKELM
EQLEEKLAKKEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYCGHEEPVPGTCPECGSEHIRFFG
TGTQRVEEELTKVLPQARVIRMDVDTTSRKGAHEKLLSAFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDF
RAAEKTFQLLTQVSGRAGRHEKPGTVVIQTYTPSHYSIQLTKTHDYETFFQQEMAHRRAQSYPPYYYVALVTVSHEEAAK
AAVTAEKITNYLRAGCGPDTKILGPAASPIARIKDRYRYQCVIKYRQENELQVQLKKILEHYKRDIAQKHVMISIDMNPY
MLM

Nucleotide

• Length: 2412 bp

>NTDB_id=894743 AAVC70_RS19210 WP_061573883.1 3497035..3499446(+) (priA) [Bacillus amyloliquefaciens strain Fad 97]
ATGAATGTGGCAGAAGTCATTGTCGATGTCAGCTCCAAAAACATTGACAGGCCCTTTGATTACAGAATTCCCGATCATTT
AAGAGGGATGATCGAAGTCGGCATGCGGGTGATTGTCCCGTTCGGCCCGCGCAAGCTTCAAGGGTTCGTGACCGGTTTGA
AAGATTCGTCTGAATTAAACGGCGGGCAAATGAAGGAAGTCGAGAAGCTTCTTGATTTGACACCCGTTTTGACGGAAGAG
CTGATGCAGCTGTCTTCATGGCTTTCTGACAAAACGCTGTCGTTTAAAATCACGGCGCTTCAGGCAATGCTGCCGGCCGC
GCTGAAGGCGAAGTACGAGAAAGAGCTGAAAGTCGTTGACGAAGAAGCGCTGACACCGGACATCAGGCAGCTTTTCAGAA
ATCAGAAGAGCCTTCTGTACTCAGATATTACCGATGAACGCATTCTTTCGGCACTGCAAAAATTCGTGCGCAAAGGAAGC
ATTGATGTCACCTATAAAGTCGCCCAGAAAACGAATAAAAAAATGATCCGCATGATTGAGGCGGGGGCAGACAAAGAAGA
ACTCGCCCGGCACGCAGATTCATTGACAAAACAGGCTTCTAAACAGCTTGCCGTGCTTACTTATTTTATTGACGGTGGAG
CAAAGATTTCCGCGGCTGAGCTTTGCCAAAAGACCGATTCCAGTTCAGCGACGCTGAAAACGCTTCTTAAAAAGGGGCTT
CTTACGGATAGCTTTGAGGAGGTTTACCGCGATCCTTATCAGGACAGAATGTTCAAAAAAACAGAACCTCTCTCTCTTAC
TGAAGAGCAACAGGCCGCTTTTGAGCCGATTAAGAAGGCCGTAGCCGATCATGTTCATCACGTCTTTCTGCTTCACGGTG
TGACAGGGAGCGGCAAAACGGAAATTTACCTGCAATCTATTGAAAAGGTGCTGGCTAAAGGAAAAGAAGCCATCGTGCTC
GTTCCGGAAATCTCATTGACGCCGCAAATGGTCAATCGTTTTAAAGGCCGCTTCGGTTCACAGGTTGCGGTCATGCACAG
CGGATTGTCCACAGGTGAAAAATACGATGAATGGCGGAAAATTCAGCGTAAGGAAGTAAAGCTTGTCGTCGGAGCCAGGT
CGGCCATCTTTGCCCCATTTGAAAATCTCGGCATGATCATTATTGATGAAGAGCACGAATCCTCCTATAAGCAGGAGGAA
ATGCCGCGGTACCATGCAAAAGACGTAGCCATACGCAGGGCCGAGCATCACAGCTGTCCGGTCGTCCTCGGGAGCGCCAC
GCCGACATTGGAGTCATTCGCACGGGCGAAAAAAGGCGTTTATGAGCTGCTCCCGCTGAAACACCGCGTAAATCGCCAGC
TCATGCCGGATGTATCTCTCGTTGATATGAGAGAAGAACTGCGAAACGGAAACAGATCGATGTTTTCAAAAGAGCTGATG
GAACAGCTGGAGGAGAAGCTTGCGAAAAAAGAGCAGGCCGTTCTCTTTCTGAATAAACGGGGATATTCTTCGTTTGTGAT
GTGCCGGGACTGCGGTTATGTGCCCCAATGTCCGCATTGCGACATTTCAATGACCTATCACCGCTACGGACAAAGGCTCA
AATGCCATTACTGCGGTCATGAGGAGCCTGTTCCGGGAACGTGCCCGGAATGCGGCAGTGAGCATATCCGCTTTTTCGGC
ACGGGAACGCAGCGTGTAGAGGAGGAGCTTACCAAAGTGCTGCCTCAGGCGCGCGTGATCAGGATGGATGTGGACACGAC
CTCAAGAAAAGGCGCTCATGAAAAGCTATTGTCAGCTTTCGGTGAAGGAAAAGCGGATATCCTGCTCGGTACGCAAATGA
TCGCAAAAGGGCTTGATTTTCCGAACGTGACGCTCGTCGGAGTATTAAGCGCAGATACGACGCTTCACATCCCTGATTTC
AGGGCGGCGGAGAAGACATTTCAGCTGTTGACGCAGGTAAGCGGACGGGCCGGGCGGCATGAAAAGCCGGGAACGGTAGT
CATACAAACGTACACACCGTCTCATTACAGCATTCAGCTGACGAAAACGCATGACTATGAAACTTTCTTTCAGCAGGAGA
TGGCGCACAGGCGGGCCCAGTCATATCCGCCTTACTATTATGTGGCGCTGGTGACCGTTTCTCATGAAGAAGCGGCAAAA
GCCGCGGTCACCGCTGAAAAGATTACAAACTATTTAAGAGCGGGATGCGGACCGGACACGAAAATTCTCGGGCCGGCGGC
TTCCCCGATTGCCAGGATCAAAGATAGATATCGCTATCAATGCGTGATAAAATACAGACAGGAAAACGAGTTGCAGGTTC
AGTTGAAAAAAATTCTGGAGCATTATAAACGCGACATTGCGCAAAAGCATGTAATGATTTCAATTGATATGAATCCGTAC
ATGCTGATGTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (562-660)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (517-543)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-105)

• Primosomal protein N C-terminal domain (PriA_C) (704-799)

• Type III restriction enzyme, res subunit (ResIII) (265-429)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	83.727	100	0.839