Detailed information NTG0894680

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: R3L08_RS18220
• Genome accession: NZ_CP137066
• Coordinates: 3799199..3799900 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SNUBHAB0277
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3794199..3804900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L08_RS18185 (R3L08_18185)	kdsB	3794722..3795483 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
R3L08_RS18190 (R3L08_18190)	-	3795495..3796475 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
R3L08_RS18195 (R3L08_18195)	-	3796487..3796828 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
R3L08_RS18200 (R3L08_18200)	-	3796846..3797619 (+)	774	WP_000497298.1	TatD family hydrolase	-
R3L08_RS18205 (R3L08_18205)	-	3797657..3798265 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
R3L08_RS18210 (R3L08_18210)	-	3798275..3798829 (+)	555	WP_000841373.1	type II secretion system protein	-
R3L08_RS18215 (R3L08_18215)	xcpV	3798819..3799199 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
R3L08_RS18220 (R3L08_18220)	xcpW	3799199..3799900 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
R3L08_RS18225 (R3L08_18225)	gspK	3799900..3800859 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
R3L08_RS18230 (R3L08_18230)	-	3801090..3801686 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
R3L08_RS18235 (R3L08_18235)	ung	3801737..3802450 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
R3L08_RS18240 (R3L08_18240)	-	3802447..3803571 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
R3L08_RS18245 (R3L08_18245)	tadA	3803578..3804081 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
R3L08_RS18250 (R3L08_18250)	-	3804151..3804594 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=894680 R3L08_RS18220 WP_000594589.1 3799199..3799900(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0277]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=894680 R3L08_RS18220 WP_000594589.1 3799199..3799900(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0277]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996