Detailed information NTG0894477

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: R3L12_RS11215
• Genome accession: NZ_CP137057
• Coordinates: 2362151..2363221 (-)
• Length: 356 a.a.
• NCBI ID: WP_055415627.1
• Uniprot ID: -
• Organism: Acinetobacter soli strain SNUBHAB0075
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2357151..2368221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L12_RS11190 (R3L12_11170)	aroK	2357536..2358078 (-)	543	WP_004934229.1	shikimate kinase AroK	-
R3L12_RS11195 (R3L12_11175)	comQ	2358115..2360211 (-)	2097	WP_171490462.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L12_RS11200 (R3L12_11180)	comL	2360271..2360795 (-)	525	WP_004934225.1	pilus assembly protein PilP	Machinery gene
R3L12_RS11205 (R3L12_11185)	comO	2360795..2361529 (-)	735	WP_055415626.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L12_RS11210 (R3L12_11190)	comN	2361526..2362164 (-)	639	WP_149930066.1	PilN domain-containing protein	Machinery gene
R3L12_RS11215 (R3L12_11195)	comM	2362151..2363221 (-)	1071	WP_055415627.1	pilus assembly protein PilM	Machinery gene
R3L12_RS11220 (R3L12_11200)	ponA	2363388..2365919 (+)	2532	WP_149930047.1	penicillin-binding protein PBP1a	-
R3L12_RS11225 (R3L12_11205)	-	2365936..2366757 (-)	822	WP_149930048.1	putative RNA methyltransferase	-
R3L12_RS11230 (R3L12_11210)	mraY	2366816..2367934 (-)	1119	WP_149930049.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 39412.86 Da
• Isoelectric Point: 4.5137

>NTDB_id=894477 R3L12_RS11215 WP_055415627.1 2362151..2363221(-) (comM) [Acinetobacter soli strain SNUBHAB0075]
MLRLYRKTNKGLVGVDISSTSVKVLELSAKNDRYCVESYGLIPLQESSVVEKNILNPEAVADALTRAINLANPQATQAAI
AVPTSMVVHKLIEMDADMTDDEREVQIRMDAERFIPFPLDEVSLDFEVTPERPANPNRVNVLIAATRTENVDTRVEVLEL
AGLTPKVADVESYAMERAFQVFADTLPMGVSTVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQKRYGMSYEE
AGRAKKDGSLPEDFTAEVFEPYLEALVQQAARSLQFFFSSSQYNEIDHILLAGGNANIPGLARLLQQKLGYRVTVANPFL
QMDFSPQVDVRKIENDAASLMVACGLALRSFDDDTH

Nucleotide

• Length: 1071 bp

>NTDB_id=894477 R3L12_RS11215 WP_055415627.1 2362151..2363221(-) (comM) [Acinetobacter soli strain SNUBHAB0075]
GTGCTCAGATTATACCGTAAAACCAATAAGGGGTTGGTTGGGGTTGATATCAGTTCGACTTCGGTCAAAGTACTCGAGCT
CTCTGCCAAAAATGATCGTTACTGTGTAGAAAGTTATGGCTTGATTCCGCTGCAAGAAAGCAGTGTGGTTGAGAAAAATA
TTCTTAATCCTGAAGCGGTGGCCGACGCATTGACGCGCGCCATCAATCTGGCCAATCCACAAGCGACCCAAGCGGCCATT
GCAGTGCCCACCTCAATGGTCGTACACAAACTGATCGAAATGGATGCCGACATGACCGATGATGAGCGAGAAGTTCAGAT
TCGAATGGATGCCGAGCGTTTTATTCCATTTCCTTTAGATGAAGTCAGTCTTGATTTTGAAGTCACGCCAGAACGCCCAG
CCAATCCTAATCGGGTCAATGTTCTGATTGCAGCGACACGTACCGAAAATGTCGATACGCGTGTTGAAGTGCTGGAGCTG
GCAGGTTTAACGCCTAAGGTGGCAGATGTTGAAAGCTATGCCATGGAGCGTGCATTTCAGGTTTTTGCCGATACCTTGCC
GATGGGCGTAAGTACGGTGGGAATTTTAGATATTGGCCATACCATGACCACGCTGTCGGTGATGCAAAATGGCAAGATTA
TCTATACCCGCGAGCAGGTTTTTGGCGGTAAACAACTCACTCAAGACGTTCAAAAACGCTATGGAATGTCTTATGAAGAA
GCAGGACGTGCCAAAAAAGACGGTTCGTTGCCCGAGGATTTTACCGCAGAAGTGTTTGAGCCCTACCTAGAAGCGCTGGT
TCAGCAGGCGGCGCGTTCATTACAGTTTTTCTTTTCATCTTCGCAGTACAACGAAATTGACCATATTTTGCTCGCAGGCG
GAAATGCCAATATTCCGGGGCTAGCCCGATTGTTGCAGCAAAAACTGGGCTATCGGGTGACGGTGGCCAATCCGTTTTTA
CAAATGGATTTTTCACCACAGGTGGATGTTCGCAAGATCGAAAATGATGCTGCATCGCTCATGGTGGCATGTGGACTGGC
CTTGAGGAGTTTCGATGATGACACGCATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	90.368	99.157	0.896
pilM	Acinetobacter baumannii D1279779	82.67	98.876	0.817
comM	Acinetobacter nosocomialis M2	82.102	98.876	0.812
pilM	Legionella pneumophila strain ERS1305867	42.373	99.438	0.421