Detailed information NTG0892148

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAC934_RS14010
• Genome accession: NZ_CP152362
• Coordinates: 2704239..2705504 (+)
• Length: 421 a.a.
• NCBI ID: WP_342623167.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain LP
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2699239..2710504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAC934_RS13990 (AAC934_13990)	yrrB	2700609..2701229 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
AAC934_RS13995 (AAC934_13995)	mnmA	2701315..2702430 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AAC934_RS14000 (AAC934_14000)	iscSA	2702458..2703600 (-)	1143	WP_342623166.1	cysteine desulfurase family protein	-
AAC934_RS14005 (AAC934_14005)	cymR	2703619..2704035 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AAC934_RS14010 (AAC934_14010)	rarA	2704239..2705504 (+)	1266	WP_342623167.1	replication-associated recombination protein A	Machinery gene
AAC934_RS14015 (AAC934_14015)	tcdA	2705546..2706310 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
AAC934_RS14025 (AAC934_14025)	aspS	2706646..2708424 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AAC934_RS14030 (AAC934_14030)	hisS	2708438..2709712 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
AAC934_RS14035 (AAC934_14035)	yrzK	2710094..2710264 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.39 Da
• Isoelectric Point: 7.2042

>NTDB_id=892148 AAC934_RS14010 WP_342623167.1 2704239..2705504(+) (rarA) [Bacillus subtilis strain LP]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIKAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=892148 AAC934_RS14010 WP_342623167.1 2704239..2705504(+) (rarA) [Bacillus subtilis strain LP]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGTTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAATGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAAAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993