Detailed information NTG0892048

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RAS18_RS13435
• Genome accession: NZ_CP136635
• Coordinates: 2675664..2678057 (-)
• Length: 797 a.a.
• NCBI ID: WP_406620687.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus subsp. globigii strain Hab-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2670664..2683057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAS18_RS13400	-	2671722..2672450 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
RAS18_RS13405	-	2672473..2673300 (+)	828	WP_406620685.1	transporter substrate-binding domain-containing protein	-
RAS18_RS13410	-	2673362..2674012 (+)	651	WP_010789323.1	amino acid ABC transporter permease	-
RAS18_RS13415	-	2674031..2674687 (+)	657	WP_061669876.1	amino acid ABC transporter permease	-
RAS18_RS13420	-	2674724..2674855 (-)	132	WP_003325315.1	YrzQ family protein	-
RAS18_RS13425	-	2674880..2675071 (-)	192	WP_003325314.1	hypothetical protein	-
RAS18_RS13430	-	2675084..2675548 (-)	465	WP_406620686.1	PRC-barrel domain-containing protein	-
RAS18_RS13435	recD2	2675664..2678057 (-)	2394	WP_406620687.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RAS18_RS13440	-	2678091..2678711 (-)	621	WP_106044388.1	tetratricopeptide repeat protein	-
RAS18_RS13445	mnmA	2678802..2679917 (-)	1116	WP_061572694.1	tRNA 2-thiouridine(34) synthase MnmA	-
RAS18_RS13450	-	2679954..2681093 (-)	1140	WP_406620688.1	cysteine desulfurase family protein	-
RAS18_RS13455	cymR	2681112..2681528 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
RAS18_RS13460	-	2681730..2682998 (+)	1269	WP_406622011.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89276.95 Da
• Isoelectric Point: 5.1233

>NTDB_id=892048 RAS18_RS13435 WP_406620687.1 2675664..2678057(-) (recD2) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDNRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEDITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=892048 RAS18_RS13435 WP_406620687.1 2675664..2678057(-) (recD2) [Bacillus atrophaeus subsp. globigii strain Hab-5]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACCACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTAAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCCGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATA
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCCGAGTTTTTACTGGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCTTCCCCGATGCTCCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCCGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTGAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGATGAAAATCCGATTGAAGGTAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATCCCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTATTGGCTTCGCAGGTCATTCC
TACAGTCAGGCTGACGGATATTTATCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCATGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGTTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAACGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGTGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATA
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAACACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGATGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCATGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTACTTCCTGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAATGGGGTGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGACATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92