Detailed information NTG0891373

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AAFX34_RS17575
• Genome accession: NZ_CP151937
• Coordinates: 2184436..2185785 (-)
• Length: 449 a.a.
• NCBI ID: WP_053542164.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain TBV029
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2179436..2190785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX34_RS17560 (AAFX34_18115)	bioB	2180505..2181557 (-)	1053	WP_011080761.1	biotin synthase BioB	-
AAFX34_RS17565 (AAFX34_18120)	bioA	2181698..2182975 (+)	1278	WP_061058409.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
AAFX34_RS17570 (AAFX34_18125)	serS	2183037..2184344 (-)	1308	WP_045597741.1	serine--tRNA ligase	-
AAFX34_RS17575 (AAFX34_18130)	rarA	2184436..2185785 (-)	1350	WP_053542164.1	replication-associated recombination protein A	Machinery gene
AAFX34_RS17580 (AAFX34_18135)	lolA	2185792..2186388 (-)	597	WP_011080765.1	outer membrane lipoprotein chaperone LolA	-
AAFX34_RS17585 (AAFX34_18140)	-	2186461..2189412 (-)	2952	WP_061058408.1	DNA translocase FtsK	-
AAFX34_RS17590 (AAFX34_18145)	lrp	2189557..2190051 (-)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49720.05 Da
• Isoelectric Point: 5.6790

>NTDB_id=891373 AAFX34_RS17575 WP_053542164.1 2184436..2185785(-) (rarA) [Vibrio vulnificus strain TBV029]
MSNYTLDFSGDEDFRPLAARMRPETVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKEIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWSARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=891373 AAFX34_RS17575 WP_053542164.1 2184436..2185785(-) (rarA) [Vibrio vulnificus strain TBV029]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGGTCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGCCCTGGTAAGCCATTACGTCGCGCGTTAGAGGCCGGCCACATTCATTCAA
TGATTCTGTGGGGACCTCCAGGTACAGGCAAGACAACATTAGCGGAAGTAGCCGCAAACTACGCCAATGCGGAAGTTGAA
CGCGTCTCTGCGGTCACGTCCGGCGTGAAAGAAATTCGGGCCGCAATTGAAAAAGCACGTGAGAACAAAATGGCGGGGCG
TCGCACCATCTTGTTTGTGGATGAGGTACATCGCTTTAATAAATCACAGCAAGATGCCTTTTTACCGCACATTGAAGATG
GGACGGTGACCTTTATCGGCGCGACCACAGAAAATCCATCGTTTGAACTGAACAACGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTGGCATTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCAGCACACTTTGCTGATAATGTCTTGGATCGTCTGGCTGAGCTCGTCAATGGTGATGCGCGAATGTCTCTTA
ACTATCTTGAGCTGCTGTATGACATGGCAGAAGACAATGCTCAGGGTGAAAAAGAGATCACGCTAAAGCTACTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGTTTTGATAATAAAGGCGACATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGCGGCTCAAACCCGGACGCTGCGCTTTATTGGTCGGCGAGAATGATCGCTGCCGGTTGTGATCCACTCTATATCGCGC
GACGTTTGCTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGACCCGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCGCCGAAAAG
TAACGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCACATAATCTTCCTGAATTTGAAGTGCCTTTCCATTTGC
GTAATGCACCGACCGGATTGATGAAAGATCTCGGTTATGGAGAAGGTTATCGATACGCTCATGATGAACCAGGGGCCTAC
GCCGCAGGCGAACAATATTTGCCTGCTGAAATTGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

• AAA C-terminal domain (AAA_assoc_2) (189-268)

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.953	94.209	0.376