Detailed information NTG0889191

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RWU44_RS09985
• Genome accession: NZ_CP136168
• Coordinates: 2123476..2124177 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABO21-A059
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2118476..2129177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWU44_RS09955 (RWU44_09955)	-	2118782..2119225 (-)	444	WP_001246675.1	SRPBCC family protein	-
RWU44_RS09960 (RWU44_09960)	tadA	2119295..2119798 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RWU44_RS09965 (RWU44_09965)	-	2119805..2120929 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RWU44_RS09970 (RWU44_09970)	ung	2120926..2121639 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RWU44_RS09975 (RWU44_09975)	-	2121690..2122286 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
RWU44_RS09980 (RWU44_09980)	gspK	2122517..2123476 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RWU44_RS09985 (RWU44_09985)	xcpW	2123476..2124177 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RWU44_RS09990 (RWU44_09990)	xcpV	2124177..2124557 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RWU44_RS09995 (RWU44_09995)	-	2124547..2125101 (-)	555	WP_000841373.1	type II secretion system protein	-
RWU44_RS10000 (RWU44_10000)	-	2125111..2125719 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RWU44_RS10005 (RWU44_10005)	-	2125757..2126530 (-)	774	WP_000497298.1	TatD family hydrolase	-
RWU44_RS10010 (RWU44_10010)	-	2126548..2126889 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RWU44_RS10015 (RWU44_10015)	-	2126901..2127881 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RWU44_RS10020 (RWU44_10020)	kdsB	2127893..2128654 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=889191 RWU44_RS09985 WP_000594589.1 2123476..2124177(-) (xcpW) [Acinetobacter baumannii strain ABO21-A059]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889191 RWU44_RS09985 WP_000594589.1 2123476..2124177(-) (xcpW) [Acinetobacter baumannii strain ABO21-A059]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996