Detailed information NTG0889150

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RWU16_RS13795
• Genome accession: NZ_CP136167
• Coordinates: 2908129..2909247 (+)
• Length: 372 a.a.
• NCBI ID: WP_317856483.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABO21-A061
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2903129..2914247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWU16_RS13785 (RWU16_13785)	-	2906245..2906937 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
RWU16_RS13790 (RWU16_13790)	pilT	2907064..2908101 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
RWU16_RS13795 (RWU16_13795)	pilU	2908129..2909247 (+)	1119	WP_317856483.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
RWU16_RS13800 (RWU16_13800)	fur	2909317..2909754 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
RWU16_RS13805 (RWU16_13805)	-	2909866..2910264 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
RWU16_RS13810 (RWU16_13810)	-	2910319..2910642 (-)	324	WP_000442587.1	RnfH family protein	-
RWU16_RS13815 (RWU16_13815)	-	2910642..2911709 (-)	1068	WP_002019572.1	hypothetical protein	-
RWU16_RS13820 (RWU16_13820)	-	2911862..2912317 (-)	456	WP_000782976.1	bacteriohemerythrin	-
RWU16_RS13825 (RWU16_13825)	-	2912570..2913418 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41947.15 Da
• Isoelectric Point: 6.6945

>NTDB_id=889150 RWU16_RS13795 WP_317856483.1 2908129..2909247(+) (pilU) [Acinetobacter baumannii strain ABO21-A061]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFEQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=889150 RWU16_RS13795 WP_317856483.1 2908129..2909247(+) (pilU) [Acinetobacter baumannii strain ABO21-A061]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGAGCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	52.973	99.462	0.527
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392