Detailed information NTG0889097

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RWX82_RS09980
• Genome accession: NZ_CP136166
• Coordinates: 2123791..2124492 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABO21-A063
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2118791..2129492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWX82_RS09950 (RWX82_09950)	-	2119097..2119540 (-)	444	WP_001246675.1	SRPBCC family protein	-
RWX82_RS09955 (RWX82_09955)	tadA	2119610..2120113 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RWX82_RS09960 (RWX82_09960)	-	2120120..2121244 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RWX82_RS09965 (RWX82_09965)	ung	2121241..2121954 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RWX82_RS09970 (RWX82_09970)	-	2122005..2122601 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
RWX82_RS09975 (RWX82_09975)	gspK	2122832..2123791 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RWX82_RS09980 (RWX82_09980)	xcpW	2123791..2124492 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RWX82_RS09985 (RWX82_09985)	xcpV	2124492..2124872 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RWX82_RS09990 (RWX82_09990)	-	2124862..2125416 (-)	555	WP_000841373.1	type II secretion system protein	-
RWX82_RS09995 (RWX82_09995)	-	2125426..2126034 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RWX82_RS10000 (RWX82_10000)	-	2126072..2126845 (-)	774	WP_000497298.1	TatD family hydrolase	-
RWX82_RS10005 (RWX82_10005)	-	2126863..2127204 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RWX82_RS10010 (RWX82_10010)	-	2127216..2128196 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RWX82_RS10015 (RWX82_10015)	kdsB	2128208..2128969 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=889097 RWX82_RS09980 WP_000594589.1 2123791..2124492(-) (xcpW) [Acinetobacter baumannii strain ABO21-A063]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889097 RWX82_RS09980 WP_000594589.1 2123791..2124492(-) (xcpW) [Acinetobacter baumannii strain ABO21-A063]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996