Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   F6I35_RS08705 Genome accession   NZ_CP136160
Coordinates   1654880..1656646 (-) Length   588 a.a.
NCBI ID   WP_024052690.1    Uniprot ID   A0A413KRC3
Organism   Streptococcus anginosus strain UMB8616     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649880..1661646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS08685 (F6I35_0008680) manA 1650926..1651870 (-) 945 WP_024052685.1 mannose-6-phosphate isomerase, class I -
  F6I35_RS08690 (F6I35_0008685) - 1651901..1652626 (-) 726 WP_070815099.1 GntR family transcriptional regulator -
  F6I35_RS08695 (F6I35_0008690) - 1652660..1652785 (-) 126 Protein_1670 PTS cellobiose transporter subunit IIC -
  F6I35_RS08700 (F6I35_0008695) rcrQ 1653130..1654890 (-) 1761 WP_024052689.1 ABC transporter ATP-binding protein Regulator
  F6I35_RS08705 (F6I35_0008700) rcrP 1654880..1656646 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  F6I35_RS08710 (F6I35_0008705) - 1656639..1657097 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator -
  F6I35_RS08715 (F6I35_0008710) - 1657234..1657644 (-) 411 WP_024052692.1 peptide deformylase -
  F6I35_RS08720 (F6I35_0008715) scrK 1657712..1658611 (-) 900 WP_024052693.1 fructokinase ScrK -
  F6I35_RS08725 (F6I35_0008720) - 1658887..1660785 (-) 1899 WP_024052694.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65121.87 Da        Isoelectric Point: 6.3384

>NTDB_id=888975 F6I35_RS08705 WP_024052690.1 1654880..1656646(-) (rcrP) [Streptococcus anginosus strain UMB8616]
MVKLFKRLTVKEVGLIIISILFTCLAVYLDLEVPTYISKITELLQTKGTVVSDLWNPGLKMIGLSFASFLSAVVVGFIAA
RLAASFTTSLRSDIFNRVLDYSNAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPGRLPIFSDMVVFMSYAMQVVMGFMLMAALFIVLPRTLVSAGRINEVLDLY
STIESPTEPKIAKDVKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGKILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWAALDLAQAKSFVEEKEDGLQSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=888975 F6I35_RS08705 WP_024052690.1 1654880..1656646(-) (rcrP) [Streptococcus anginosus strain UMB8616]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGCTGATTATCATCAGTATCTTATTTACTTGTTTGGCAGT
TTATTTGGACTTAGAGGTTCCAACCTATATTTCAAAAATTACGGAACTCCTACAGACGAAAGGAACGGTCGTTTCTGATT
TGTGGAATCCGGGCTTGAAAATGATTGGATTGTCATTTGCTAGTTTTCTCAGTGCTGTGGTAGTTGGTTTTATTGCGGCT
AGATTGGCAGCTAGCTTTACAACGAGCTTGCGCTCAGATATTTTCAATCGTGTACTGGATTATTCAAATGCTGAGATTAA
GAGATTTTCTATTCCAAGTCTTTTAACGCGGACAACCAACGATCTTACGCAAATTCAGCTCATGATTACCATGGGCTTGC
AAGTTGTGACGCGTGGGCCGATTATGGCGATTTGGGCGATTACAAAAATCATTGGGAAATCAGAATACTGGCTGTGGGCA
GTTATTGTGGCGGTTATTGTGAATATTATCATGACAACAGTTCTGATGACGTTGGCCTTTCCAAAGCAATCCGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTACAATGCTGAAG
ACTATCAAGATGATAAATTTGCAGGAGCTAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCGATT
TTAAATCCGATTATGATGGGGATTTCGAGTGGTTTGACCTTGGCAATATACTGGATTGGTGCTTACTTGATTCAAGATGC
AGCTTTACCAGGACGTTTGCCAATCTTTAGTGACATGGTTGTCTTTATGTCCTATGCTATGCAGGTCGTAATGGGCTTCA
TGCTCATGGCTGCTCTGTTTATCGTTCTTCCTCGTACCTTGGTGTCTGCCGGACGGATCAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAACGGAGCCAAAAATAGCGAAAGATGTCAAAGGGGAAGTGGTATTTGACAATGTGTCTTTCCG
CTATGCTAAAAATTCTGAGGCTGTTATCGAACATGTTAGCTTTACAGCTAAAGCAGGTGAAACCGTAGCTTTCATTGGAT
CAACCGGTTCTGGGAAATCCACTTTAATCAGCTTAATTCCTCGTTTCTATGATGTGACAGAAGGAAAAATTTTAGTGGAT
GGCGTAAACGTCAAAGATTATCAGCTGGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATCAAGAGTAATTTAGACTTTGGGCAAAGCAATGAAAGCCCATTGGATGACGAAAAAATGTGGGCTGCACTTG
ATTTGGCACAGGCTAAATCATTTGTTGAAGAAAAAGAAGACGGTTTGCAATCTGAAGTTGCACAAAGCGGTACGAATTTC
TCTGGTGGGCAAAAGCAACGTTTGGCGATTGCGCGTGCGCTTGCTCGCAAGCCTGAAATTTTGATTTTTGATGATTCGTT
TTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGTGAAAGATACAACCAGATTGATTG
TGGCGCAACGGATTTCAACGATTATGGATGCCGATCAGATTTTGGTACTGGATAAAGGAAAAGTAGTTGGTCAGGGTACT
CATAAAGAATTGCTGGCAACGAACGCAGTTTATCAAGAAATTGCTTACTCACAATTATCGAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-291)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A413KRC3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.667

100

0.721