Detailed information NTG0887836

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RUL31_RS14100
• Genome accession: NZ_CP135964
• Coordinates: 2871821..2874214 (-)
• Length: 797 a.a.
• NCBI ID: WP_010789325.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain CD303
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2866821..2879214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUL31_RS14065 (RUL31_14065)	-	2867879..2868607 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
RUL31_RS14070 (RUL31_14070)	-	2868630..2869457 (+)	828	WP_390840672.1	transporter substrate-binding domain-containing protein	-
RUL31_RS14075 (RUL31_14075)	-	2869519..2870169 (+)	651	WP_010789323.1	amino acid ABC transporter permease	-
RUL31_RS14080 (RUL31_14080)	-	2870188..2870844 (+)	657	WP_315915472.1	amino acid ABC transporter permease	-
RUL31_RS14085 (RUL31_14085)	-	2870881..2871012 (-)	132	WP_003325315.1	YrzQ family protein	-
RUL31_RS14090 (RUL31_14090)	-	2871037..2871228 (-)	192	WP_003325314.1	hypothetical protein	-
RUL31_RS14095 (RUL31_14095)	-	2871241..2871705 (-)	465	WP_315915474.1	PRC-barrel domain-containing protein	-
RUL31_RS14100 (RUL31_14100)	recD2	2871821..2874214 (-)	2394	WP_010789325.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RUL31_RS14105 (RUL31_14105)	-	2874248..2874868 (-)	621	WP_315917068.1	tetratricopeptide repeat protein	-
RUL31_RS14110 (RUL31_14110)	mnmA	2874959..2876074 (-)	1116	WP_315915479.1	tRNA 2-thiouridine(34) synthase MnmA	-
RUL31_RS14115 (RUL31_14115)	-	2876108..2877250 (-)	1143	WP_315915481.1	cysteine desulfurase family protein	-
RUL31_RS14120 (RUL31_14120)	cymR	2877269..2877685 (-)	417	WP_315915482.1	cysteine metabolism transcriptional regulator CymR	-
RUL31_RS14125 (RUL31_14125)	-	2877887..2879155 (+)	1269	WP_315917069.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89219.90 Da
• Isoelectric Point: 5.1233

>NTDB_id=887836 RUL31_RS14100 WP_010789325.1 2871821..2874214(-) (recD2) [Bacillus atrophaeus strain CD303]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=887836 RUL31_RS14100 WP_010789325.1 2871821..2874214(-) (recD2) [Bacillus atrophaeus strain CD303]
GTGCAACAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTATTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTA
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGACATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCCGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTC
GAAAAGGTCGTCACCAATGCTCTGAAAAAAGGTTACACAGCAAGAGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTTATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	92.095	100	0.921