Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | QZH34_RS18970 | Genome accession | NZ_CP135587 |
| Coordinates | 3642966..3643745 (-) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain BA20200413YY | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3608644..3682567 | 3642966..3643745 | within | 0 |
Gene organization within MGE regions
Location: 3608644..3682567
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QZH34_RS18820 (QZH34_18780) | - | 3608988..3610658 (-) | 1671 | WP_000823085.1 | ribonuclease J | - |
| QZH34_RS18825 (QZH34_18785) | dapA | 3611424..3612302 (-) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| QZH34_RS18830 (QZH34_18790) | dapG | 3612314..3613546 (-) | 1233 | WP_000692470.1 | aspartate kinase | - |
| QZH34_RS18835 (QZH34_18795) | asd | 3613570..3614616 (-) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| QZH34_RS18840 (QZH34_18800) | dpaB | 3614767..3615366 (-) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| QZH34_RS18845 (QZH34_18805) | dpaA | 3615363..3616265 (-) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| QZH34_RS18850 (QZH34_18810) | - | 3616540..3616791 (-) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| QZH34_RS18855 (QZH34_18815) | - | 3616918..3618159 (-) | 1242 | WP_000592993.1 | pitrilysin family protein | - |
| QZH34_RS18860 (QZH34_18820) | - | 3618246..3619145 (-) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| QZH34_RS18865 (QZH34_18825) | pnp | 3619297..3621435 (-) | 2139 | WP_000076733.1 | polyribonucleotide nucleotidyltransferase | - |
| QZH34_RS18870 (QZH34_18830) | rpsO | 3621596..3621865 (-) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| QZH34_RS18875 (QZH34_18835) | ribF | 3621966..3622937 (-) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| QZH34_RS18880 (QZH34_18840) | truB | 3622981..3623904 (-) | 924 | WP_404978092.1 | tRNA pseudouridine(55) synthase TruB | - |
| QZH34_RS18885 (QZH34_18845) | rbfA | 3623991..3624347 (-) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| QZH34_RS18890 (QZH34_18850) | - | 3624363..3624644 (-) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| QZH34_RS18895 (QZH34_18855) | infB | 3624641..3626701 (-) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| QZH34_RS18900 (QZH34_18860) | - | 3626706..3627017 (-) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| QZH34_RS18905 (QZH34_18865) | rnpM | 3627018..3627290 (-) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| QZH34_RS18910 (QZH34_18870) | nusA | 3627302..3628408 (-) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| QZH34_RS18915 (QZH34_18875) | rimP | 3628426..3628896 (-) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| QZH34_RS18920 (QZH34_18880) | - | 3629229..3633530 (-) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| QZH34_RS18925 (QZH34_18885) | - | 3633655..3635355 (-) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| QZH34_RS18930 (QZH34_18890) | rseP | 3635465..3636721 (-) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| QZH34_RS18935 (QZH34_18895) | dxr | 3636738..3637880 (-) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| QZH34_RS18940 (QZH34_18900) | cdsA | 3637904..3638695 (-) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| QZH34_RS18945 (QZH34_18905) | uppS | 3638713..3639489 (-) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| QZH34_RS18950 (QZH34_18910) | frr | 3639575..3640132 (-) | 558 | WP_000531498.1 | ribosome recycling factor | - |
| QZH34_RS18955 (QZH34_18915) | pyrH | 3640135..3640857 (-) | 723 | WP_000042663.1 | UMP kinase | - |
| QZH34_RS18960 (QZH34_18920) | tsf | 3640924..3641811 (-) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| QZH34_RS18965 (QZH34_18925) | rpsB | 3641915..3642616 (-) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| QZH34_RS18970 (QZH34_18930) | codY | 3642966..3643745 (-) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| QZH34_RS18975 (QZH34_18935) | hslU | 3643823..3645214 (-) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| QZH34_RS18980 (QZH34_18940) | hslV | 3645237..3645779 (-) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| QZH34_RS18985 (QZH34_18945) | xerC | 3645822..3646721 (-) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| QZH34_RS18990 (QZH34_18950) | trmFO | 3646787..3648091 (-) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| QZH34_RS18995 (QZH34_18955) | topA | 3648142..3650220 (-) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| QZH34_RS19000 (QZH34_18960) | dprA | 3650365..3651113 (-) | 749 | Protein_3705 | DNA-processing protein DprA | - |
| QZH34_RS19005 (QZH34_18965) | sucD | 3651321..3652223 (-) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| QZH34_RS19010 (QZH34_18970) | sucC | 3652244..3653404 (-) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| QZH34_RS19015 (QZH34_18975) | rnhB | 3653598..3654371 (-) | 774 | WP_001174712.1 | ribonuclease HII | - |
| QZH34_RS19020 (QZH34_18980) | ylqF | 3654423..3655313 (-) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| QZH34_RS19025 (QZH34_18985) | lepB | 3655334..3655885 (-) | 552 | WP_000711857.1 | signal peptidase I | - |
| QZH34_RS19030 (QZH34_18990) | rplS | 3655987..3656331 (-) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| QZH34_RS19035 (QZH34_18995) | trmD | 3656478..3657212 (-) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| QZH34_RS19040 (QZH34_19000) | rimM | 3657212..3657727 (-) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| QZH34_RS19045 (QZH34_19005) | - | 3657848..3658075 (-) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| QZH34_RS19050 (QZH34_19010) | rpsP | 3658090..3658362 (-) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| QZH34_RS19055 (QZH34_19015) | ffh | 3658463..3659812 (-) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| QZH34_RS19060 (QZH34_19020) | - | 3659825..3660157 (-) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| QZH34_RS19065 (QZH34_19025) | ftsY | 3660290..3661279 (-) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| QZH34_RS19070 (QZH34_19030) | smc | 3661295..3664864 (-) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| QZH34_RS19075 (QZH34_19035) | rncS | 3665011..3665748 (-) | 738 | WP_001146873.1 | ribonuclease III | - |
| QZH34_RS19080 (QZH34_19040) | acpP | 3665807..3666040 (-) | 234 | WP_000786062.1 | acyl carrier protein | - |
| QZH34_RS19085 (QZH34_19045) | fabG | 3666110..3666850 (-) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| QZH34_RS19090 (QZH34_19050) | fabD | 3666850..3667794 (-) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| QZH34_RS19095 (QZH34_19055) | plsX | 3667809..3668801 (-) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| QZH34_RS19100 (QZH34_19060) | fapR | 3668798..3669391 (-) | 594 | WP_000747352.1 | transcription factor FapR | - |
| QZH34_RS19105 (QZH34_19065) | recG | 3669480..3671528 (-) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| QZH34_RS19110 (QZH34_19070) | - | 3671818..3673494 (-) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| QZH34_RS19115 (QZH34_19075) | - | 3673517..3673879 (-) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| QZH34_RS19120 (QZH34_19080) | rpmB | 3674258..3674446 (+) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| QZH34_RS19125 (QZH34_19085) | spoVM | 3674519..3674599 (-) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| QZH34_RS19130 (QZH34_19090) | - | 3674666..3675346 (-) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| QZH34_RS19135 (QZH34_19095) | rpe | 3675446..3676090 (-) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| QZH34_RS19140 (QZH34_19100) | rsgA | 3676093..3676974 (-) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| QZH34_RS19145 (QZH34_19105) | prkC | 3677243..3679216 (-) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| QZH34_RS19150 (QZH34_19110) | - | 3679225..3679977 (-) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| QZH34_RS19155 (QZH34_19115) | rlmN | 3679982..3681070 (-) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| QZH34_RS19160 (QZH34_19120) | rsmB | 3681075..3682409 (-) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=886983 QZH34_RS18970 WP_000421288.1 3642966..3643745(-) (codY) [Bacillus anthracis strain BA20200413YY]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=886983 QZH34_RS18970 WP_000421288.1 3642966..3643745(-) (codY) [Bacillus anthracis strain BA20200413YY]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |