Detailed information NTG0886479

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RRV45_RS16005
• Genome accession: NZ_CP135435
• Coordinates: 3185885..3188308 (-)
• Length: 807 a.a.
• NCBI ID: WP_315665682.1
• Uniprot ID: A0AA96MRV0
• Organism: Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3180885..3193308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RRV45_RS15975 (RRV45_15975)	-	3182421..3183503 (-)	1083	WP_315665677.1	AI-2E family transporter	-
RRV45_RS15980 (RRV45_15980)	-	3183608..3184549 (-)	942	WP_315665678.1	c-type cytochrome	-
RRV45_RS15985 (RRV45_15985)	-	3184654..3184779 (-)	126	WP_315669061.1	YrzQ family protein	-
RRV45_RS15990 (RRV45_15990)	-	3184869..3185060 (-)	192	WP_315665679.1	hypothetical protein	-
RRV45_RS15995 (RRV45_15995)	-	3185073..3185546 (-)	474	WP_315665680.1	PRC-barrel domain-containing protein	-
RRV45_RS16000 (RRV45_16000)	-	3185653..3185817 (-)	165	WP_315665681.1	hypothetical protein	-
RRV45_RS16005 (RRV45_16005)	recD2	3185885..3188308 (-)	2424	WP_315665682.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RRV45_RS16010 (RRV45_16010)	-	3188342..3189001 (-)	660	WP_315665683.1	tetratricopeptide repeat protein	-
RRV45_RS16015 (RRV45_16015)	mnmA	3189129..3190244 (-)	1116	WP_315665684.1	tRNA 2-thiouridine(34) synthase MnmA	-
RRV45_RS16020 (RRV45_16020)	-	3190276..3191418 (-)	1143	WP_315665685.1	cysteine desulfurase family protein	-
RRV45_RS16025 (RRV45_16025)	cymR	3191752..3192171 (-)	420	WP_315665686.1	cysteine metabolism transcriptional regulator CymR	-
RRV45_RS16030 (RRV45_16030)	-	3192171..3192845 (-)	675	WP_315669063.1	YitT family protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91676.16 Da
• Isoelectric Point: 5.3095

>NTDB_id=886479 RRV45_RS16005 WP_315665682.1 3185885..3188308(-) (recD2) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MDKQGSQGTLDLFSEKEKKYMKGRHLVTIFHNEQNLYTVLRIRVDETNHHYEDKEAVITGYFPKMHEQETYIFYGDLKEH
PKFGVQLHASHYRKDIPQTKQGVVNYLSSELFKGIGKKTAENIVEILGENAITKILNEPSLLDGIPKLAPEKAKSLYDTL
MQHQGIEQAMIALNEYGFGPQLSMRIYQFYKEQTIETVQNNPYKLVEDIEGIGFGRADELGYKLGISGNHPARIRAASLY
ILEMESMQAGHVYMEARELLQSAKRLLEENQRDEIQFNDISNEVIKLQEEGKIMVEEQRLYLPSLYFSEKGLVTNIKRIL
NQTQFNEQFPESEFLLALGKLEERLKVQYAPTQKEAIQTSLMSPMLILTGGPGTGKTTVIKGIVELYAELHGCSLNPKDY
KKEEPFPFLLAAPTGRAAKRMAESTGLPAVTIHRLLGWNGTEAFDRNEENLLQGKILIVDETSMVDIWLANQLFKALPEN
LQVILVGDEDQLPSVGPGQVLKDLLQSERIPTVRLTDIYRQAEGSSIIELAHEMKKGKLPVNVTAQQADRSFFQCSPGQI
SAVVEKIVLNAKKKGYTAKDIQVLAPMYRGPAGIDKLNEILQEIFNPNPDGSRKELAFGDVKYRIGDKVLQLVNQPESHV
FNGDMGEIVSIFYAKENTEKQDMIIVSFDGTEVTYTRQDLNQITLAYCCSVHKSQGSEFPIVILPVVKSYYRMLRRNLLY
TAITRSKQFLILCGEEEALRLGVERADELSRLTTLTKRLIEAISDVIHEEKAEDKEELPIFEMLMKIDPLIGMENITPYD
FMETERS

Nucleotide

• Length: 2424 bp

>NTDB_id=886479 RRV45_RS16005 WP_315665682.1 3185885..3188308(-) (recD2) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
ATGGATAAGCAGGGCTCACAGGGGACTTTAGATTTATTTTCTGAAAAAGAAAAGAAATACATGAAAGGCCGGCATCTTGT
AACCATTTTTCATAATGAACAAAATTTATATACGGTTTTACGGATTCGTGTGGATGAAACAAATCATCATTATGAAGATA
AAGAAGCTGTCATTACAGGTTATTTTCCGAAAATGCATGAGCAGGAAACTTATATTTTTTACGGAGATTTGAAGGAACAC
CCTAAATTTGGAGTCCAGCTTCATGCTAGCCATTATCGCAAGGATATCCCCCAGACCAAACAAGGCGTTGTTAATTACCT
TTCAAGTGAGTTATTTAAAGGTATTGGTAAAAAAACAGCCGAAAATATCGTTGAAATACTAGGGGAAAATGCTATAACCA
AAATTCTTAATGAGCCTTCCCTTCTTGACGGAATTCCAAAACTGGCTCCTGAAAAAGCAAAGTCTTTATACGATACATTG
ATGCAGCATCAAGGCATTGAGCAGGCCATGATTGCTTTAAATGAATATGGATTTGGACCTCAGCTCTCAATGAGGATCTA
CCAATTTTACAAAGAGCAGACGATCGAAACAGTCCAGAATAATCCTTATAAGCTCGTAGAGGATATTGAGGGAATTGGAT
TTGGCAGGGCAGATGAGCTGGGATATAAGCTTGGAATATCGGGCAATCATCCAGCAAGAATAAGAGCAGCAAGCCTTTAC
ATATTAGAAATGGAAAGCATGCAGGCTGGCCATGTATACATGGAAGCGAGAGAGCTTCTTCAAAGCGCGAAAAGACTTTT
AGAGGAAAATCAGCGTGATGAAATCCAATTTAATGATATTTCTAATGAGGTTATAAAGCTCCAGGAAGAGGGAAAAATCA
TGGTCGAGGAGCAAAGATTATATTTGCCTTCACTTTATTTTTCAGAAAAGGGCCTTGTTACAAATATCAAACGAATTTTG
AACCAAACTCAATTTAATGAACAATTCCCGGAATCAGAGTTTCTTCTGGCGCTTGGAAAATTAGAAGAACGTTTAAAGGT
TCAATATGCGCCGACACAGAAAGAGGCAATCCAAACGTCGCTTATGTCTCCAATGCTGATACTAACTGGCGGTCCAGGTA
CAGGGAAGACAACGGTAATTAAAGGGATTGTTGAATTATACGCGGAACTGCATGGCTGTTCGTTAAATCCTAAGGATTAC
AAGAAGGAGGAGCCTTTTCCATTCCTGTTAGCCGCACCAACTGGAAGAGCGGCTAAGAGGATGGCGGAATCCACAGGCCT
GCCCGCGGTCACTATTCACAGGCTTCTAGGGTGGAATGGAACAGAGGCATTCGATCGTAATGAAGAAAATTTATTGCAAG
GAAAAATCTTAATTGTTGATGAAACCTCCATGGTTGATATTTGGCTGGCCAATCAGCTATTTAAAGCGCTCCCGGAAAAT
TTGCAAGTGATCTTAGTTGGGGATGAGGATCAGCTTCCATCAGTAGGGCCAGGCCAGGTTCTAAAAGATTTGCTGCAGTC
TGAGAGAATTCCTACTGTTCGGTTAACAGACATTTACAGGCAAGCGGAGGGATCATCGATAATAGAGCTTGCCCATGAAA
TGAAAAAAGGAAAGCTTCCGGTAAACGTGACGGCGCAGCAAGCGGACAGATCTTTTTTTCAATGCAGTCCAGGCCAAATT
TCAGCGGTCGTTGAAAAAATTGTTTTAAATGCAAAGAAGAAGGGATATACAGCGAAGGACATTCAGGTTTTAGCCCCGAT
GTATAGAGGTCCAGCAGGTATTGATAAGCTGAATGAGATTCTTCAGGAGATTTTCAATCCTAATCCTGACGGAAGTCGAA
AAGAGCTCGCGTTTGGGGATGTTAAATACCGAATTGGCGATAAGGTTCTTCAGCTTGTCAATCAGCCTGAAAGTCATGTT
TTTAATGGGGATATGGGTGAAATCGTTTCTATATTCTATGCAAAAGAAAATACGGAAAAGCAGGATATGATTATTGTGTC
CTTTGATGGAACGGAAGTGACTTACACACGCCAGGACTTAAATCAAATTACCCTTGCTTATTGCTGTTCTGTCCATAAAT
CCCAGGGAAGTGAGTTTCCGATTGTGATTCTGCCCGTTGTGAAGAGTTATTATCGCATGCTCCGAAGAAATTTGCTGTAT
ACAGCTATTACACGCAGTAAACAATTTCTAATTTTATGCGGGGAAGAAGAAGCTTTAAGGCTTGGGGTAGAAAGGGCGGA
TGAACTCTCTAGGCTGACTACATTAACGAAAAGGCTAATTGAGGCCATATCGGACGTCATACATGAAGAGAAAGCTGAAG
ATAAGGAAGAACTTCCAATTTTTGAAATGCTAATGAAAATTGATCCATTAATAGGCATGGAAAATATCACGCCGTATGAT
TTTATGGAAACCGAAAGAAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (597-668)

• Helix-hairpin-helix containing domain (HHH_RecD2) (163-253)

• AAA domain (AAA_30) (349-555)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (686-733)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	62.281	98.885	0.616