Detailed information NTG0886195

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RP314_RS06950
• Genome accession: NZ_CP135199
• Coordinates: 1343781..1346159 (+)
• Length: 792 a.a.
• NCBI ID: WP_058906208.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CMML21-47
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1338781..1351159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RP314_RS06925 (RP314_06925)	-	1338865..1340133 (-)	1269	WP_176283442.1	replication-associated recombination protein A	-
RP314_RS06930 (RP314_06930)	cymR	1340328..1340744 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
RP314_RS06935 (RP314_06935)	-	1340763..1341902 (+)	1140	WP_071391560.1	cysteine desulfurase family protein	-
RP314_RS06940 (RP314_06940)	mnmA	1341939..1343054 (+)	1116	WP_058906210.1	tRNA 2-thiouridine(34) synthase MnmA	-
RP314_RS06945 (RP314_06945)	-	1343142..1343762 (+)	621	WP_088005508.1	lipopolysaccharide assembly protein LapB	-
RP314_RS06950 (RP314_06950)	recD2	1343781..1346159 (+)	2379	WP_058906208.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RP314_RS06955 (RP314_06955)	-	1346278..1346736 (+)	459	WP_017418223.1	PRC-barrel domain-containing protein	-
RP314_RS06960 (RP314_06960)	-	1346749..1346940 (+)	192	WP_003152738.1	hypothetical protein	-
RP314_RS06965 (RP314_06965)	-	1346962..1347093 (+)	132	WP_003152741.1	YrzQ family protein	-
RP314_RS06970 (RP314_06970)	-	1347129..1347785 (-)	657	WP_077722637.1	amino acid ABC transporter permease	-
RP314_RS06975 (RP314_06975)	-	1347804..1348454 (-)	651	WP_058906206.1	amino acid ABC transporter permease	-
RP314_RS06980 (RP314_06980)	-	1348511..1349338 (-)	828	WP_077722636.1	transporter substrate-binding domain-containing protein	-
RP314_RS06985 (RP314_06985)	-	1349359..1350087 (-)	729	WP_003152746.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88348.04 Da
• Isoelectric Point: 4.9490

>NTDB_id=886195 RP314_RS06950 WP_058906208.1 1343781..1346159(+) (recD2) [Bacillus velezensis strain CMML21-47]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIIVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=886195 RP314_RS06950 WP_058906208.1 1343781..1346159(+) (recD2) [Bacillus velezensis strain CMML21-47]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGTCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAGATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATTGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCCGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTTCTTGCGCTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCCTCGCCGATGCTTTTACTGACCGGAGGACCGGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGAGTATCGCTTGACCCTGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGAATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTTGGCTGGAATGGCGCTGAAGGCTTTACCTATAATGAAGATCAGCCGATTGAAGGAAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTATAGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTACGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGGCTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGACCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGGGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCGTACTGCTGTTCCATCCATAAGTCGCAGGGAAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACATCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATACG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.128	99.874	0.89