Detailed information NTG0885691

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RQL83_RS09865
• Genome accession: NZ_CP135151
• Coordinates: 2071679..2072494 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain AR3676
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2066679..2077494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RQL83_RS09835 (RQL83_09870)	-	2066987..2067427 (-)	441	WP_002121449.1	SRPBCC family protein	-
RQL83_RS09840 (RQL83_09875)	tadA	2067498..2068001 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
RQL83_RS09845 (RQL83_09880)	hibch	2068007..2069131 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
RQL83_RS09850 (RQL83_09885)	ung	2069128..2069841 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
RQL83_RS09855 (RQL83_09890)	-	2069895..2070491 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
RQL83_RS09860 (RQL83_09895)	gspK	2070719..2071678 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
RQL83_RS09865 (RQL83_09900)	xcpW	2071679..2072494 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RQL83_RS09870 (RQL83_09905)	xcpV	2072494..2072874 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
RQL83_RS09875 (RQL83_09910)	-	2072864..2073418 (-)	555	WP_002121405.1	type II secretion system protein	-
RQL83_RS09880 (RQL83_09915)	-	2073425..2074033 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
RQL83_RS09885 (RQL83_09920)	ycfH	2074070..2074843 (-)	774	WP_002121462.1	TatD family hydrolase	-
RQL83_RS09890 (RQL83_09925)	pilZ	2074861..2075202 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
RQL83_RS09895 (RQL83_09930)	holB	2075213..2076193 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
RQL83_RS09900 (RQL83_09935)	kdsB	2076207..2076968 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=885691 RQL83_RS09865 WP_002121460.1 2071679..2072494(-) (xcpW) [Acinetobacter pittii strain AR3676]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=885691 RQL83_RS09865 WP_002121460.1 2071679..2072494(-) (xcpW) [Acinetobacter pittii strain AR3676]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738