Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | OCUAc18_RS17195 | Genome accession | NZ_AP024802 |
| Coordinates | 3540746..3541171 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain OCU Ac18 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3535746..3546171
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAc18_RS17165 (OCUAc18_33640) | - | 3536280..3537311 (+) | 1032 | WP_002125597.1 | lipase secretion chaperone | - |
| OCUAc18_RS17170 (OCUAc18_33650) | - | 3537426..3538367 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| OCUAc18_RS17175 (OCUAc18_33660) | rplS | 3538420..3538788 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| OCUAc18_RS17180 (OCUAc18_33670) | trmD | 3538994..3539734 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OCUAc18_RS17185 (OCUAc18_33680) | rimM | 3539780..3540328 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| OCUAc18_RS17190 (OCUAc18_33690) | rpsP | 3540348..3540599 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| OCUAc18_RS17195 (OCUAc18_33700) | pilE | 3540746..3541171 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| OCUAc18_RS17200 (OCUAc18_33710) | pilY2 | 3541168..3541650 (-) | 483 | WP_001046418.1 | type IV pilin protein | Machinery gene |
| OCUAc18_RS17205 (OCUAc18_33720) | pilY1 | 3541663..3545517 (-) | 3855 | WP_000768940.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=88566 OCUAc18_RS17195 WP_000788339.1 3540746..3541171(-) (pilE) [Acinetobacter baumannii strain OCU Ac18]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=88566 OCUAc18_RS17195 WP_000788339.1 3540746..3541171(-) (pilE) [Acinetobacter baumannii strain OCU Ac18]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |