Detailed information NTG0088506

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OCUAc17_RS10135
• Genome accession: NZ_AP024798
• Coordinates: 2109145..2109960 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain OCU Ac17
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2104145..2114960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCUAc17_RS10105 (OCUAc17_19580)	-	2104453..2104893 (-)	441	WP_002121449.1	SRPBCC family protein	-
OCUAc17_RS10110 (OCUAc17_19590)	tadA	2104964..2105467 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
OCUAc17_RS10115 (OCUAc17_19600)	hibch	2105473..2106597 (-)	1125	WP_221255009.1	enoyl-CoA hydratase/isomerase family protein	-
OCUAc17_RS10120 (OCUAc17_19610)	ung	2106594..2107307 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
OCUAc17_RS10125 (OCUAc17_19620)	-	2107361..2107957 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
OCUAc17_RS10130 (OCUAc17_19630)	gspK	2108185..2109144 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
OCUAc17_RS10135 (OCUAc17_19640)	xcpW	2109145..2109960 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OCUAc17_RS10140 (OCUAc17_19650)	xcpV	2109960..2110340 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
OCUAc17_RS10145 (OCUAc17_19660)	-	2110330..2110884 (-)	555	WP_002121405.1	type II secretion system protein	-
OCUAc17_RS10150 (OCUAc17_19670)	-	2110891..2111499 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
OCUAc17_RS10155 (OCUAc17_19680)	ycfH	2111536..2112309 (-)	774	WP_002121462.1	TatD family hydrolase	-
OCUAc17_RS10160 (OCUAc17_19690)	pilZ	2112327..2112668 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
OCUAc17_RS10165 (OCUAc17_19700)	holB	2112679..2113659 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
OCUAc17_RS10170 (OCUAc17_19710)	kdsB	2113673..2114434 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=88506 OCUAc17_RS10135 WP_002121460.1 2109145..2109960(-) (xcpW) [Acinetobacter pittii strain OCU Ac17]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=88506 OCUAc17_RS10135 WP_002121460.1 2109145..2109960(-) (xcpW) [Acinetobacter pittii strain OCU Ac17]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738