Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   QN282_RS06785 Genome accession   NZ_CP134689
Coordinates   1331803..1333620 (-) Length   605 a.a.
NCBI ID   WP_410531094.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain HU05/19     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1326803..1338620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN282_RS06765 (QN282_06745) - 1327408..1328637 (-) 1230 WP_000489528.1 sensor histidine kinase -
  QN282_RS06770 (QN282_06750) - 1328637..1329323 (-) 687 WP_001264419.1 response regulator transcription factor -
  QN282_RS06775 (QN282_06755) - 1329325..1329951 (-) 627 WP_000449644.1 GTP pyrophosphokinase family protein -
  QN282_RS06780 (QN282_06760) rcrQ 1330059..1331813 (-) 1755 WP_000851087.1 ABC transporter ATP-binding protein Regulator
  QN282_RS06785 (QN282_06765) rcrP 1331803..1333620 (-) 1818 WP_410531094.1 ABC transporter ATP-binding protein Regulator
  QN282_RS06790 (QN282_06770) - 1333667..1334107 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator -
  QN282_RS06795 (QN282_06775) - 1334376..1336448 (+) 2073 WP_000726920.1 surface-anchored 5'-nucleotidase -
  QN282_RS06800 (QN282_06780) - 1336485..1336895 (-) 411 WP_000594935.1 peptide deformylase -
  QN282_RS06805 (QN282_06785) gdhA 1336965..1338314 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 67397.18 Da        Isoelectric Point: 7.5752

>NTDB_id=882821 QN282_RS06785 WP_410531094.1 1331803..1333620(-) (rcrP) [Streptococcus agalactiae strain HU05/19]
MFNIFKRLNGKEWLMIVASTILVCLAVWMDLKTPEYMSDITRMLQTKGTKLEALWDPGLKMLAFSFGSFLVAVMVGFLGA
RTAASFTSRLRSDIFNHVMDYSDAEIKRFSIPSLLTRTTNDLTQLQILIVMGMQVVTRGPIMAIWALTKIWGKSDQWTGA
AGVAVIIVMILLSVLLLLAFPRQRQIQGFTDALNATTREALSGVRVIRAYNAEKYQTDKFKRENDDLTKLNLFVYRLMSL
MNPVMTVVSSGLTLAIYWIGSYLINDISVPKVTGTSVSVLAAKSAITDRVDLFSNMVVFSSYAMQVVMGFMMMVAIFIIM
PRALVSARRINEVLTLAPTVTFKENSHIQSAPKGQIEFQDVSFHYSKDSEAVIEHVSFKADTGQTVAFIGSTGSGKSTLV
NLVPRFYDATEGSIKLDGIDIKEYSHNDLNNKIGYIPQKAVLFSGTVRSNMIFGESGREELSDEQIWQALELAQAKEFIE
AKEKGLDTEVAQGGSNFSGGQKQRLAIARALARHPEILIFDDSFSALDYKTDHILRHVLKEKTAAMTKLIVAQRISTIMD
ADLILVLNQGKVVGQGTHKELLSNNEVYQEIAYSQLSKEELENEN

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=882821 QN282_RS06785 WP_410531094.1 1331803..1333620(-) (rcrP) [Streptococcus agalactiae strain HU05/19]
ATGTTTAATATTTTCAAGCGACTCAATGGTAAAGAATGGTTGATGATTGTGGCGAGTACTATATTAGTGTGTCTAGCGGT
TTGGATGGACCTAAAGACTCCAGAATATATGTCTGATATCACACGTATGTTGCAAACTAAAGGTACAAAGTTAGAGGCTC
TTTGGGATCCTGGACTAAAAATGCTTGCTTTTTCATTTGGTAGTTTTTTAGTAGCAGTAATGGTAGGTTTTTTAGGTGCT
AGGACAGCAGCTAGTTTTACTAGTCGATTACGTTCAGATATTTTTAACCATGTGATGGATTATTCTGATGCAGAAATTAA
GCGATTTTCTATCCCCTCTCTATTAACGCGCACAACTAACGACTTGACTCAGCTACAGATCCTTATTGTAATGGGAATGC
AGGTTGTTACCCGTGGACCAATTATGGCAATATGGGCCTTGACTAAAATTTGGGGTAAAAGCGATCAATGGACTGGGGCA
GCTGGAGTAGCGGTTATTATCGTTATGATATTACTTAGCGTTCTACTCTTACTTGCTTTTCCGAGACAACGTCAAATCCA
AGGTTTTACAGATGCGCTTAATGCAACTACTAGAGAGGCACTCTCTGGTGTTAGAGTTATTCGTGCCTACAATGCTGAAA
AGTATCAAACAGATAAGTTCAAACGTGAAAATGACGATTTAACAAAATTGAACCTTTTTGTTTATAGATTGATGTCGCTT
ATGAATCCTGTGATGACAGTGGTTTCATCTGGATTGACTTTAGCTATTTATTGGATTGGCTCTTATTTGATTAATGATAT
TTCTGTGCCTAAAGTTACAGGAACAAGTGTATCTGTATTGGCTGCTAAATCAGCTATCACTGATCGAGTGGATCTTTTTT
CAAACATGGTTGTTTTTTCATCTTATGCTATGCAAGTTGTTATGGGATTTATGATGATGGTAGCTATTTTTATCATCATG
CCTCGTGCTTTAGTATCGGCTAGACGTATTAATGAGGTACTAACTTTAGCCCCAACAGTAACTTTTAAAGAAAATAGTCA
TATCCAAAGTGCACCAAAAGGTCAAATTGAGTTTCAAGATGTGTCATTTCATTATAGTAAAGATTCTGAAGCGGTTATTG
AACATGTATCTTTCAAAGCAGATACTGGTCAGACAGTGGCATTTATTGGGTCTACAGGTTCTGGAAAATCCACTTTAGTC
AATTTAGTTCCACGTTTTTATGACGCCACAGAGGGGTCAATTAAACTTGATGGCATTGATATAAAGGAATACTCTCACAA
TGATTTGAATAATAAAATTGGCTATATTCCACAGAAAGCTGTTCTCTTTAGTGGGACAGTACGTTCTAATATGATTTTTG
GAGAGAGTGGCAGGGAGGAACTTAGTGATGAACAAATTTGGCAAGCACTCGAATTAGCGCAAGCTAAAGAATTTATAGAA
GCTAAAGAAAAAGGATTAGATACAGAAGTCGCTCAAGGTGGTAGTAACTTTTCAGGAGGACAAAAACAACGCTTGGCAAT
CGCACGTGCTTTAGCACGTCACCCTGAAATTCTCATTTTTGATGACTCATTTTCAGCGTTAGATTATAAAACAGATCATA
TTTTACGCCATGTGCTGAAAGAAAAAACAGCTGCTATGACGAAATTAATTGTCGCTCAACGCATTTCAACTATCATGGAT
GCTGATCTCATTTTAGTGCTAAATCAAGGTAAAGTTGTTGGGCAAGGAACACATAAGGAATTGTTATCAAATAATGAAGT
ATATCAAGAGATAGCCTATTCTCAATTGTCTAAGGAGGAATTGGAAAATGAAAACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(374-523)

ABC transporter transmembrane region (ABC_membrane)

(58-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

77.944

99.669

0.777