Detailed information NTG0882215

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RKS75_RS08445
• Genome accession: NZ_CP134599
• Coordinates: 1713036..1713737 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XH1015
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1708036..1718737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKS75_RS08410 (RKS75_08405)	kdsB	1708559..1709320 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
RKS75_RS08415 (RKS75_08410)	-	1709332..1710312 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RKS75_RS08420 (RKS75_08415)	-	1710324..1710665 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
RKS75_RS08425 (RKS75_08420)	-	1710683..1711456 (+)	774	WP_000497298.1	TatD family hydrolase	-
RKS75_RS08430 (RKS75_08425)	-	1711494..1712102 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RKS75_RS08435 (RKS75_08430)	-	1712112..1712666 (+)	555	WP_000841373.1	type II secretion system protein	-
RKS75_RS08440 (RKS75_08435)	xcpV	1712656..1713036 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RKS75_RS08445 (RKS75_08440)	xcpW	1713036..1713737 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RKS75_RS08450 (RKS75_08445)	gspK	1713737..1714696 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RKS75_RS08455 (RKS75_08450)	-	1714927..1715523 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
RKS75_RS08460 (RKS75_08455)	ung	1715574..1716287 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
RKS75_RS08465 (RKS75_08460)	-	1716284..1717408 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RKS75_RS08470 (RKS75_08465)	tadA	1717415..1717918 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RKS75_RS08475 (RKS75_08470)	-	1717988..1718431 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=882215 RKS75_RS08445 WP_000594589.1 1713036..1713737(+) (xcpW) [Acinetobacter baumannii strain XH1015]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=882215 RKS75_RS08445 WP_000594589.1 1713036..1713737(+) (xcpW) [Acinetobacter baumannii strain XH1015]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996