Detailed information NTG0880459

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: AAAF57_RS01360
• Genome accession: NZ_CP150847
• Coordinates: 243103..245607 (-)
• Length: 834 a.a.
• NCBI ID: WP_410536755.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 238103..250607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAAF57_RS01330 (AAAF57_01330)	-	239389..239619 (-)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-
AAAF57_RS01335 (AAAF57_01335)	tsaB	239880..240566 (+)	687	WP_410536745.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
AAAF57_RS01340 (AAAF57_01340)	rimI	240526..240981 (+)	456	WP_410536747.1	ribosomal protein S18-alanine N-acetyltransferase	-
AAAF57_RS01345 (AAAF57_01345)	tsaD	240981..241994 (+)	1014	WP_410536749.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
AAAF57_RS01350 (AAAF57_01350)	-	242046..242738 (+)	693	WP_410536751.1	AzlC family ABC transporter permease	-
AAAF57_RS01355 (AAAF57_01355)	-	242725..243051 (+)	327	WP_410536753.1	AzlD domain-containing protein	-
AAAF57_RS01360 (AAAF57_01360)	recD/recD2/recDB	243103..245607 (-)	2505	WP_410536755.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AAAF57_RS01365 (AAAF57_01365)	lepB	245668..246291 (-)	624	WP_060971708.1	signal peptidase I	-
AAAF57_RS01370 (AAAF57_01370)	rnhC	246310..247200 (-)	891	WP_410536757.1	ribonuclease HIII	-
AAAF57_RS01375 (AAAF57_01375)	zapA	247517..247831 (+)	315	WP_004183554.1	cell division protein ZapA	-
AAAF57_RS01380 (AAAF57_01380)	-	247828..248370 (+)	543	WP_410536759.1	CvpA family protein	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93662.96 Da
• Isoelectric Point: 4.4476

>NTDB_id=880459 AAAF57_RS01360 WP_410536755.1 243103..245607(-) (recD/recD2/recDB) [Streptococcus salivarius strain KSS5]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLEGARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDVSSEDKILDSL
EGVEEELGITYDQVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQIPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QINNLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEAKANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKIALAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAIHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATDASNQTKKENNGSSEPLENKDISGNLNPSPALINTYSQPVDKSVNKPV
QTEENYRLTEDNWATIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=880459 AAAF57_RS01360 WP_410536755.1 243103..245607(-) (recD/recD2/recDB) [Streptococcus salivarius strain KSS5]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTTCGTATCTTACTCTT
AGAGATTGACGAAACGGACAGTGATTTTGAAGACTACGAAATCATTGTCACAGGAACTATGGGGGATGTCATGGAGGGTG
AGGACTATACCTTCTGGGGCCAACTAACCAATCACCCTAAATATGGGGAACAGCTACAAATGACCCGCTACGAGCGTTCA
AAACCTTCTGCCAGCGGTCTTATCAAATATTTTGCCAGCGACAATTTCAAAGGAATCGGTAAGAAAACGGCCGAGCGTAT
TGTCGAAATTTACGGAGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCGAGTTAGAGCAAATCCCCAACCTCTCCA
AGGTCAATCGAGAAGCCTTTGTTGCTAAGTTAAAAATCAATTATGGAGCCGAGCAAATCCTGTCCAAACTTTCTAGCTAC
GGACTCACACCAAAGGCCGCCTCACAAATTTTCAACCAATATAAGGAAGAGTCACTAAATCTTATTGAGGAACACCCCTA
TCTATTAGTAGAGGAGATTCAAGGAATCGGTTTTAAAATGGCTGACCAACTAGCTGAACGTCTTGGAATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTACTAGAAGCCAGTATGGAAGAAGGCGACACTTACATAGAAGCC
AAAGCCTTGCTTGAACGGACCATCATTCTTTTGGAAGGTGCTCGTCCGATTGAACTTGACCCCGCCTTGGTCGCTAACCA
ATTAACTAATCTTATCCAAGAGGATAAGGTGCAAAATGTAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAGGACCAACCTGACGTCAGCTCTGAAGACAAAATCTTAGACAGCCTT
GAAGGAGTGGAAGAGGAGCTTGGTATTACTTATGATCAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCTGACCTTCATG
GCCTCGATCTCAAAAAGTCTGATTTACCTATTATTTTAGCAGCACCAACGGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAAATCCCTAGCGCCACTATTCATAGACATTTGGGCCTCAATAGCGAGGACGATTTTAAGACCTTAGAGGACTATCT
CGATTGCGATTTGATTATCATCGATGAGTTCTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTTATCATTGTGGGTGACCAAGACCAACTACCTTCCGTAGGCCCTGGCCAAGTCTTGGCTGACCTTTTG
CAGATTAATAACTTGCCTAAGGTTTCCCTAACCAAAATTTTCAGACAATCCGAGGATTCCACTATCGTTACCCTAGCTAG
CCAAATGCGCCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAAGGCCAACC
ATATCCCACAGATGGTCCCTAAAATCGTCTCTGCTGCGATAAAGAGTGGGATTGCAGCTCAGGATGTTCAGATTCTAGCC
CCCATGTACCGAGGACAGGCCGGTATTAACAATCTCAATACCATTATGCAAGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTCGCCTTTAATGATATCTTCTTCCGCAAGAATGACAAGATTCTCCATCTGGTCAACGATACAGAACTCAATGTCT
TCAATGGCGACATCGGAATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTCGACGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTGCTCTGGCCTATGCCATGTCAATCCACAAATC
CCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGACGTATGCTACAACGTAACCTCATTTACA
CCGCAATCACACGTGCCAAGAGTAAACTGGTCATGCTAGGGGAAATCGCAGCCTTCGATTATGCTATTCACAACGAGGGG
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGACGCATCCAATCAAACCAAAAAGGAAAACAACGGATCCTCAGAACCCCTTGAAAACAAAGACA
TTTCGGGAAATCTAAATCCATCTCCAGCTCTTATTAACACTTATTCACAGCCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACCGAAGAAAACTATCGTTTAACTGAAGATAATTGGGCCACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCTTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• AAA domain (AAA_30) (331-523)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	44.712	89.568	0.4