Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   RG879_RS00005 Genome accession   NZ_CP134202
Coordinates   2164878..4 (+) Length   244 a.a.
NCBI ID   WP_310839678.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain Alim_agalac_1000     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2159878..5004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - spo0J 2164878..4 (+) -2164873 - - Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27601.85 Da        Isoelectric Point: 9.8254

>NTDB_id=879259 RG879_RS00005 WP_310839678.1 2164878..4(+) (spo0J) [Streptococcus agalactiae strain Alim_agalac_1000]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAF

Nucleotide


Download         Length: 0 bp        

>NTDB_id=879259 RG879_RS00005 WP_310839678.1 2164878..4(+) (spo0J) [Streptococcus agalactiae strain Alim_agalac_1000]

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.678

99.588

0.584