Detailed information NTG0875178

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RFB14_RS17335
• Genome accession: NZ_CP133587
• Coordinates: 3552120..3554378 (-)
• Length: 752 a.a.
• NCBI ID: WP_003387547.1
• Uniprot ID: -
• Organism: Brevibacillus borstelensis strain NEB264
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3547120..3559378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFB14_RS17305 (RFB14_17305)	-	3547736..3548800 (-)	1065	WP_243014999.1	AI-2E family transporter	-
RFB14_RS17310 (RFB14_17310)	-	3549194..3549880 (+)	687	WP_003387542.1	TerC family protein	-
RFB14_RS17315 (RFB14_17315)	-	3549964..3550821 (-)	858	WP_122958167.1	MurR/RpiR family transcriptional regulator	-
RFB14_RS17320 (RFB14_17320)	-	3551103..3551288 (-)	186	WP_003387544.1	hypothetical protein	-
RFB14_RS17325 (RFB14_17325)	-	3551316..3551522 (-)	207	WP_003387545.1	hypothetical protein	-
RFB14_RS17330 (RFB14_17330)	-	3551559..3552041 (-)	483	WP_003387546.1	PRC-barrel domain-containing protein	-
RFB14_RS17335 (RFB14_17335)	recD2	3552120..3554378 (-)	2259	WP_003387547.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RFB14_RS17340 (RFB14_17340)	-	3554810..3554980 (+)	171	WP_227278158.1	hypothetical protein	-
RFB14_RS17345 (RFB14_17345)	-	3555092..3556234 (-)	1143	WP_024983958.1	cysteine desulfurase family protein	-
RFB14_RS17350 (RFB14_17350)	cymR	3556247..3556666 (-)	420	WP_227278161.1	cysteine metabolism transcriptional regulator CymR	-
RFB14_RS17355 (RFB14_17355)	-	3556774..3556947 (+)	174	WP_170208318.1	hypothetical protein	-
RFB14_RS17360 (RFB14_17360)	-	3556989..3558326 (-)	1338	WP_024983959.1	AAA family ATPase	-
RFB14_RS17365 (RFB14_17365)	-	3558333..3559088 (-)	756	WP_003387554.1	ThiF family adenylyltransferase	-

Sequence

Protein

• Length: 752 a.a.
• Molecular weight: 84907.01 Da
• Isoelectric Point: 5.1617

>NTDB_id=875178 RFB14_RS17335 WP_003387547.1 3552120..3554378(-) (recD2) [Brevibacillus borstelensis strain NEB264]
MSQETLPLFAEPFVRGYVEQEIFYNEETWYGVIRLKVEETSEAIKENDVVVVGNFPRPHPEELYTFYGEWKTHPRFGQQF
AASRYERETPKTVAGVEKYLASGLFQGIGKKMAKRIVEHLGVDALSIIADRPESLAEVPGISEARAKQIYESVMEHRSLE
QAMVFLYEFGIGVQLALRIYQTYKLETLKVLSEEPYRLIEDVQGIGFKRADEIARSTGIAASSEERVQAAAIFTLQEASY
AEGHVFLPIEELCEKTLRLLHECGGHAFTPEEVRLAIEALFVASKVMWDEERVYLPSLFFAEVGLAKRLRFFADRDDFAS
FPVSELYQAMGAVEEELDITYAQTQRDAIEQAITSGLMLLTGGPGTGKTTVIRGICRVFAHLHGISFDLKKYDESNPFPI
LLAAPTGRAAKRMAETTGLPAMTLHRLLGWKGDSFEHDAEHQIRGKLLIVDEMSMVDIWLANQLFRALPSDMQIIMVGDP
DQLPSVGPGNVLQDMIRSGLLPRVQLTEIYRQAEESSIIRLAHDVRKGIVPSDLLDSSPDRRFFTSSPQDVNEAVKQICS
GAVKKGYTAKDVQVLAPMYKGNAGVNRLNEELQELFNPKTGQKREVTFGDTVFRTGDKVLQLVNNAEEHVFNGDMGEIVA
IFYPNENAENEEMIVVSFDGREVMYKRSAYHQLTLAYCCSVHKSQGSEFPIVVMPFVKNYHRMLRRKLVYTGITRSKSFL
IMCGEPEAFRIAVQTDEEGVRYSYLEERLKQG

Nucleotide

• Length: 2259 bp

>NTDB_id=875178 RFB14_RS17335 WP_003387547.1 3552120..3554378(-) (recD2) [Brevibacillus borstelensis strain NEB264]
ATGTCGCAGGAAACACTCCCTTTGTTTGCTGAACCATTCGTTCGCGGCTATGTGGAACAAGAAATTTTTTACAATGAAGA
AACGTGGTATGGAGTTATTCGTCTTAAAGTAGAGGAGACCTCGGAAGCGATCAAGGAGAATGACGTCGTTGTCGTGGGAA
ACTTCCCCCGTCCTCATCCGGAAGAGCTGTACACATTTTACGGAGAATGGAAAACACACCCCCGGTTTGGGCAGCAATTC
GCGGCTTCCCGTTATGAGCGCGAAACGCCGAAAACGGTGGCTGGCGTAGAAAAGTATCTGGCCAGTGGCCTGTTCCAGGG
AATTGGCAAAAAGATGGCCAAACGAATCGTAGAGCATCTGGGAGTCGACGCGTTGTCGATTATCGCTGACCGTCCCGAGT
CGTTGGCGGAGGTGCCTGGGATATCGGAAGCACGTGCCAAGCAGATTTATGAATCGGTGATGGAACATCGTTCTTTGGAA
CAGGCTATGGTGTTTTTGTACGAGTTCGGGATCGGAGTGCAGCTCGCATTGCGCATCTACCAGACATACAAGCTGGAGAC
CTTGAAGGTGCTTTCGGAGGAGCCGTACCGGCTGATCGAGGATGTGCAGGGGATCGGTTTCAAACGTGCGGACGAGATCG
CTCGTTCAACCGGGATCGCGGCATCCTCGGAGGAGCGGGTCCAGGCAGCAGCTATTTTTACGCTGCAGGAAGCTTCTTAT
GCCGAAGGCCACGTTTTTCTCCCGATCGAAGAGCTGTGTGAAAAAACGCTGCGCTTGCTTCATGAGTGCGGCGGACATGC
CTTTACGCCGGAAGAGGTCAGACTGGCGATTGAAGCGCTGTTTGTCGCCTCCAAAGTGATGTGGGACGAGGAGCGGGTTT
ACTTGCCAAGCCTCTTTTTTGCCGAGGTCGGCTTGGCCAAGCGGCTTCGTTTTTTTGCCGACCGCGATGACTTTGCTTCC
TTTCCGGTGTCTGAGCTGTACCAGGCCATGGGTGCAGTCGAAGAAGAGCTGGATATTACGTATGCACAGACGCAGCGGGA
TGCGATCGAACAGGCGATCACTTCTGGCTTGATGCTGCTGACAGGTGGGCCGGGTACAGGGAAAACTACTGTCATCCGGG
GGATATGTCGTGTATTTGCACATCTGCATGGAATTTCCTTCGATCTGAAAAAATATGACGAAAGCAATCCTTTTCCCATC
CTGCTGGCCGCGCCTACGGGCAGAGCGGCAAAGAGAATGGCGGAGACGACCGGGCTGCCCGCCATGACGCTTCACCGGCT
GCTTGGCTGGAAAGGCGACAGCTTTGAACATGATGCCGAACACCAGATCCGTGGAAAGCTGTTGATCGTAGATGAGATGT
CGATGGTGGACATTTGGCTTGCGAATCAATTGTTCAGAGCGCTGCCAAGCGACATGCAAATCATCATGGTTGGCGATCCG
GACCAGCTTCCGTCTGTCGGCCCGGGGAACGTTTTGCAGGACATGATTCGTTCCGGGCTATTGCCGCGCGTACAGCTTAC
GGAGATTTATCGGCAAGCGGAAGAATCGTCGATTATTCGCCTCGCCCATGATGTGCGGAAAGGAATTGTCCCGTCCGATC
TGCTGGATTCCTCCCCTGATCGCAGATTTTTCACAAGTTCGCCACAAGATGTAAACGAAGCTGTGAAACAAATTTGCTCG
GGAGCCGTAAAGAAAGGATATACAGCAAAAGATGTACAAGTCCTCGCGCCCATGTACAAAGGAAATGCGGGTGTAAACCG
GTTGAATGAAGAGCTCCAGGAGCTGTTTAATCCAAAGACCGGCCAAAAACGGGAAGTGACGTTTGGCGACACCGTATTTC
GGACGGGGGACAAAGTGCTTCAACTTGTAAACAACGCCGAAGAACACGTGTTCAACGGTGATATGGGTGAGATTGTCGCC
ATTTTTTACCCAAATGAAAACGCAGAGAATGAAGAAATGATCGTCGTCTCCTTTGATGGCCGTGAAGTGATGTACAAGCG
GTCTGCATACCATCAGCTGACGCTGGCCTACTGCTGCTCCGTTCATAAGTCGCAAGGCAGCGAGTTTCCAATCGTCGTCA
TGCCATTTGTAAAAAATTACCACAGGATGCTGCGACGGAAGCTGGTGTATACAGGAATAACGCGCAGTAAATCATTTCTC
ATCATGTGTGGAGAGCCGGAAGCGTTTCGTATCGCCGTCCAGACAGACGAAGAGGGCGTACGATACAGCTACCTGGAGGA
ACGCCTGAAACAAGGATGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix domain (HHH_5) (106-152)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-722)

• Helix-hairpin-helix containing domain (HHH_RecD2) (155-246)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-658)

• AAA domain (AAA_30) (341-535)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.267	99.734	0.501