Detailed information NTG0875105

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RE735_RS07540
• Genome accession: NZ_CP133585
• Coordinates: 1416929..1419307 (+)
• Length: 792 a.a.
• NCBI ID: WP_309175168.1
• Uniprot ID: -
• Organism: Bacillus aerius strain NEB1378
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1411929..1424307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RE735_RS07520 (RE735_07520)	cymR	1413400..1413819 (+)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-
RE735_RS07525 (RE735_07525)	-	1413838..1414980 (+)	1143	WP_309175166.1	cysteine desulfurase family protein	-
RE735_RS07530 (RE735_07530)	mnmA	1415076..1416194 (+)	1119	WP_309175167.1	tRNA 2-thiouridine(34) synthase MnmA	-
RE735_RS07535 (RE735_07535)	-	1416256..1416909 (+)	654	WP_008342707.1	tetratricopeptide repeat protein	-
RE735_RS07540 (RE735_07540)	recD2	1416929..1419307 (+)	2379	WP_309175168.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RE735_RS07545 (RE735_07545)	-	1419404..1419862 (+)	459	WP_309175169.1	PRC-barrel domain-containing protein	-
RE735_RS07550 (RE735_07550)	-	1419876..1420067 (+)	192	WP_309175170.1	hypothetical protein	-
RE735_RS07555 (RE735_07555)	-	1420088..1420219 (+)	132	WP_008342695.1	YrzQ family protein	-
RE735_RS07560 (RE735_07560)	-	1420257..1420907 (-)	651	WP_309175171.1	amino acid ABC transporter permease	-
RE735_RS07565 (RE735_07565)	-	1420923..1421576 (-)	654	WP_309175172.1	amino acid ABC transporter permease	-
RE735_RS07570 (RE735_07570)	-	1421656..1422465 (-)	810	WP_309175173.1	transporter substrate-binding domain-containing protein	-
RE735_RS07575 (RE735_07575)	-	1422480..1423208 (-)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88723.12 Da
• Isoelectric Point: 5.0156

>NTDB_id=875105 RE735_RS07540 WP_309175168.1 1416929..1419307(+) (recD2) [Bacillus aerius strain NEB1378]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKELIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKSGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFQQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFM

Nucleotide

• Length: 2379 bp

>NTDB_id=875105 RE735_RS07540 WP_309175168.1 1416929..1419307(+) (recD2) [Bacillus aerius strain NEB1378]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTTATTGAAACATCAGAGAATTTAGAGGAAAAGACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTCGGTAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATTAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGTTGCAAAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACGTACATACAAACGAAAGAACTGATTGTCGAGACCCGTAAACTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTAGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGTTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAACTTGTTA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGGCCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCGATACC
GGCAGTTACCCTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGATATTCTGCAAAGGATATTCAAGTGCTTGCTCCGATGTATAAAGGAAA
ATCTGGCATTAATGAGCTGAATAAAATGCTTCAGCAAATTTTAAATCCTAAAAAACCGAAGGGAAGAGAAATTCCTTTTG
GGGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCAGCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGTTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTACTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTTGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.95	100	0.801