Detailed information NTG0874007

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: WJ438_RS32990
• Genome accession: NZ_CP149447
• Coordinates: 6968937..6970292 (+)
• Length: 451 a.a.
• NCBI ID: WP_406728451.1
• Uniprot ID: -
• Organism: Streptomyces sp. GD-15H
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6963937..6975292

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJ438_RS32970 (WJ438_32935)	-	6964913..6965734 (-)	822	WP_406728447.1	peptidylprolyl isomerase	-
WJ438_RS32975 (WJ438_32940)	-	6965938..6966654 (+)	717	WP_406728448.1	MBL fold metallo-hydrolase	-
WJ438_RS32980 (WJ438_32945)	hisS	6966666..6967928 (+)	1263	WP_406728449.1	histidine--tRNA ligase	-
WJ438_RS32985 (WJ438_32950)	-	6968234..6968893 (+)	660	WP_406728450.1	vitamin K epoxide reductase family protein	-
WJ438_RS32990 (WJ438_32955)	rarA	6968937..6970292 (+)	1356	WP_406728451.1	replication-associated recombination protein A	Machinery gene
WJ438_RS32995 (WJ438_32960)	rpsD	6970624..6971238 (+)	615	WP_279337049.1	30S ribosomal protein S4	-
WJ438_RS33000 (WJ438_32965)	-	6971446..6971889 (+)	444	WP_406728452.1	DUF948 domain-containing protein	-
WJ438_RS33005 (WJ438_32970)	-	6971897..6972268 (+)	372	WP_406728453.1	hypothetical protein	-
WJ438_RS33010 (WJ438_32975)	alaS	6972268..6974937 (+)	2670	WP_406728454.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48060.47 Da
• Isoelectric Point: 6.7001

>NTDB_id=874007 WJ438_RS32990 WP_406728451.1 6968937..6970292(+) (rarA) [Streptomyces sp. GD-15H]
MEPDLFTAAAEERQQKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGASGPAGPSSVFLWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGYGTETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRDLLHRALGDERGLKGSVTLPEDTGEHLVRIAGGDARRALTALEAAAGAALDKGETA
ISLTTLEETVDRAAVKYDRSGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALGDVRKGLAGPVPPHLRDGHYKGAAELGHAQGYVY
PHDLPEGIARQQYAPDALKGRAYYEPTRHGAEARYADAVEWTRKHLGRKQP

Nucleotide

• Length: 1356 bp

>NTDB_id=874007 WJ438_RS32990 WP_406728451.1 6968937..6970292(+) (rarA) [Streptomyces sp. GD-15H]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGCAGAAGGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGCCCGCGCACGCTCGACGAGGTGGTGGGCCAGCAGCATCTGCTGAAGCCGGGCTCACCCCTGCGCCGGCTGGTCGGAG
AGGGCGCCTCGGGCCCCGCGGGCCCGTCCTCGGTGTTCCTGTGGGGGCCTCCCGGTACGGGTAAGACGACCCTGGCCTAC
GTCGTCTCCAAGGCCACCAACAAGCGTTTCGTCGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCTCCGGTGGGTACGGCACGGAGACCGTCCTCTTCCTCGACGAGATCCACCGTTTCAGCAAGG
CCCAGCAGGACTCCCTCCTCCCCGCGGTCGAGAACCGCTGGGTCACGCTGATCGCCGCGACCACCGAGAACCCCTACTTC
TCGGTCATCTCCCCCTTGCTCTCCCGCTCTCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACATCCGCGACCTGCT
CCACCGCGCGCTCGGCGACGAACGGGGCCTGAAGGGCTCCGTCACCCTCCCCGAGGACACCGGGGAGCATCTGGTGCGCA
TCGCCGGCGGGGACGCCCGCCGCGCCCTGACCGCCCTGGAGGCCGCCGCGGGGGCCGCGCTGGACAAGGGTGAGACGGCG
ATCTCCCTGACCACCCTGGAGGAGACCGTCGACCGGGCCGCCGTGAAGTACGACCGCTCCGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTCGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GTGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCGCTG
CCGATCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTGAGCCACGCCACCAT
CGCCCTCGCCCTGGCCCCCAAGTCCAACGCGGCCACCACCGCGATCGGTGCGGCCCTGGGCGACGTGCGCAAGGGACTGG
CCGGGCCCGTGCCGCCGCATCTGCGCGACGGGCACTACAAGGGCGCGGCCGAACTGGGCCACGCGCAGGGATACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCGCGCCAGCAGTACGCCCCGGACGCATTGAAGGGCCGCGCGTACTACGAGCCCAC
CCGGCACGGAGCCGAGGCGCGGTATGCCGACGCGGTGGAATGGACCAGGAAGCACCTCGGTAGGAAGCAGCCGTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	46.005	91.574	0.421