Detailed information NTG0873915

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: WDR05_RS14005
• Genome accession: NZ_CP149444
• Coordinates: 2675047..2676312 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HC-9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2670047..2681312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDR05_RS13985 (WDR05_13965)	yrrB	2671418..2672038 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
WDR05_RS13990 (WDR05_13970)	mnmA	2672124..2673239 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
WDR05_RS13995 (WDR05_13975)	iscSA	2673267..2674409 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
WDR05_RS14000 (WDR05_13980)	cymR	2674428..2674844 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
WDR05_RS14005 (WDR05_13985)	rarA	2675047..2676312 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
WDR05_RS14010 (WDR05_13990)	tcdA	2676352..2677116 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
WDR05_RS14020 (WDR05_14000)	aspS	2677451..2679229 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
WDR05_RS14025 (WDR05_14005)	hisS	2679243..2680517 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
WDR05_RS14030 (WDR05_14010)	yrzK	2680899..2681069 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=873915 WDR05_RS14005 WP_015714437.1 2675047..2676312(+) (rarA) [Bacillus subtilis strain HC-9]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=873915 WDR05_RS14005 WP_015714437.1 2675047..2676312(+) (rarA) [Bacillus subtilis strain HC-9]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998