Detailed information NTG0087387

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ83_RS00270
• Genome accession: NZ_AP027563
• Coordinates: 47585..48610 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LR-58-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 42585..53610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ83_RS00245 (VEE04_00460)	rraA	42999..43484 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ83_RS00250 (VEE04_00470)	menA	43577..44503 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ83_RS00255 (VEE04_00480)	hslU	44570..45901 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AABJ83_RS00260 (VEE04_00490)	hslV	45911..46441 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ83_RS00265 (VEE04_00500)	ftsN	46534..47493 (-)	960	WP_000068844.1	cell division protein FtsN	-
AABJ83_RS00270 (VEE04_00510)	cytR	47585..48610 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ83_RS00275 (VEE04_00520)	priA	48766..50964 (-)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
AABJ83_RS00280 (VEE04_00530)	rpmE	51167..51379 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ83_RS00285 (VEE04_00540)	yiiX	51440..52048 (-)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
AABJ83_RS00290 (VEE04_00550)	metJ	52108..52425 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=87387 AABJ83_RS00270 WP_000644904.1 47585..48610(-) (cytR) [Escherichia coli strain LR-58-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=87387 AABJ83_RS00270 WP_000644904.1 47585..48610(-) (cytR) [Escherichia coli strain LR-58-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628