Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | WHU22_RS19485 | Genome accession | NZ_CP148578 |
| Coordinates | 4048186..4049166 (+) | Length | 326 a.a. |
| NCBI ID | WP_021577906.1 | Uniprot ID | - |
| Organism | Escherichia coli strain Z1322HEC0005 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4043186..4054166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHU22_RS19455 (WHU22_19455) | yggM | 4043613..4044620 (+) | 1008 | WP_000745237.1 | DUF1202 family protein | - |
| WHU22_RS19460 (WHU22_19460) | hemW | 4044863..4045999 (-) | 1137 | WP_000239959.1 | radical SAM family heme chaperone HemW | - |
| WHU22_RS19465 (WHU22_19465) | rdgB | 4045992..4046585 (-) | 594 | WP_001174750.1 | XTP/dITP diphosphatase | - |
| WHU22_RS19470 (WHU22_19470) | yggU | 4046593..4046883 (-) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| WHU22_RS19475 (WHU22_19475) | yggT | 4046880..4047446 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| WHU22_RS19480 (WHU22_19480) | yggS | 4047464..4048168 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| WHU22_RS19485 (WHU22_19485) | pilT | 4048186..4049166 (+) | 981 | WP_021577906.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| WHU22_RS19490 (WHU22_19490) | ruvX | 4049350..4049766 (-) | 417 | WP_000017103.1 | Holliday junction resolvase RuvX | - |
| WHU22_RS19495 (WHU22_19495) | yqgE | 4049766..4050329 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| WHU22_RS19500 (WHU22_19500) | gshB | 4050438..4051388 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| WHU22_RS19505 (WHU22_19505) | rsmE | 4051401..4052132 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| WHU22_RS19510 (WHU22_19510) | endA | 4052212..4052919 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| WHU22_RS19515 (WHU22_19515) | yggI | 4053014..4053511 (-) | 498 | WP_001370180.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35921.12 Da Isoelectric Point: 5.5860
>NTDB_id=873135 WHU22_RS19485 WP_021577906.1 4048186..4049166(+) (pilT) [Escherichia coli strain Z1322HEC0005]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISMALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISMALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=873135 WHU22_RS19485 WP_021577906.1 4048186..4049166(+) (pilT) [Escherichia coli strain Z1322HEC0005]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGCGGC
AGTGCGTTCGCACAACGGCAAGGTATTTCTATGGCGTTACGGTTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTTGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTTGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACTTTTCAGCAGAGTTATCAGCAGCGA
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGCGGC
AGTGCGTTCGCACAACGGCAAGGTATTTCTATGGCGTTACGGTTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTTGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTTGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACTTTTCAGCAGAGTTATCAGCAGCGA
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.