Detailed information NTG0873002

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: RCG20_RS06230
• Genome accession: NZ_CP133266
• Coordinates: 1201680..1204097 (-)
• Length: 805 a.a.
• NCBI ID: WP_308183371.1
• Uniprot ID: -
• Organism: Neobacillus sp. PS3-40
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1196680..1209097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCG20_RS06210 (RCG20_06210)	-	1199631..1200701 (-)	1071	WP_308183367.1	AI-2E family transporter	-
RCG20_RS06215 (RCG20_06215)	-	1200814..1200948 (-)	135	WP_308183368.1	YrzQ family protein	-
RCG20_RS06220 (RCG20_06220)	-	1200968..1201159 (-)	192	WP_308183369.1	hypothetical protein	-
RCG20_RS06225 (RCG20_06225)	-	1201178..1201648 (-)	471	WP_308183370.1	PRC-barrel domain-containing protein	-
RCG20_RS06230 (RCG20_06230)	recD2	1201680..1204097 (-)	2418	WP_308183371.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RCG20_RS06235 (RCG20_06235)	-	1204132..1204785 (-)	654	WP_308183372.1	tetratricopeptide repeat protein	-
RCG20_RS06240 (RCG20_06240)	mnmA	1204986..1206104 (-)	1119	WP_308183373.1	tRNA 2-thiouridine(34) synthase MnmA	-
RCG20_RS06245 (RCG20_06245)	-	1206143..1207285 (-)	1143	WP_308183374.1	cysteine desulfurase family protein	-
RCG20_RS06250 (RCG20_06250)	cymR	1207332..1207751 (-)	420	WP_308183375.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90808.61 Da
• Isoelectric Point: 4.9302

>NTDB_id=873002 RCG20_RS06230 WP_308183371.1 1201680..1204097(-) (recD2) [Neobacillus sp. PS3-40]
MNQQDSMDLFAEQGKFVKGKHLVTIFHNNENFYSVLRIRVEETNDKYEDKEAVITGYFPKIHEQETYVFFGEFKDHPKFG
MQFQANHFRKDIPQTKQGVAAYLSSEMFKGIGKKTAEKIVETLGENAISKILNQPSLLDSVPKLPPEKAKMLYDTLMEHQ
GLEQVMVALNQYGFGPQLSMRIYQAYKEETLDIIQKNPYQLVEDIEGIGFGRADELGFQLGISGSHSDRIKAACLYTLES
ESMQSGHVYLDTKDLLEKVQQLLEENKRDKIEFLDISNEIIKVGEEGKLVVEEQRIYLPSLYYAEKGLVTNIDRILEKTE
YVEQFPESEFLLALGNLEERLGVQYAPTQKDAIQTALMSPMLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKEYHKKN
EAFPILLCAPTGRAAKRMSESTGLPAVTIHRLLGFNGSAGFDNDDANTLEGKIIIVDESSMVDIWLANQLFKALPENIQV
ILVGDEDQLPSVGPGQVLKDLLKSDRIPTVRLTDIYRQAEGSSIIKLAHEIKRGTLPADISVQQTDRSFIKCSSAQLAQV
VEKVALNAKNKGYSAKNIQVLAPMYKGPAGIDRLNVLLQEIFNPNPDGTRKEISFGDVKYRIGDKVLQLVNQPESNVFNG
DIGEIVSIFYSRENIEKQDMVIISFEGTEVTYTRQDLNQITHAYCCSVHKSQGSEFPIVILPVSRSYYRMLRRNLIYTAI
TRSKQFLILCGEEEALRIGVERADEEKRQTTLCEKLQNAITVKPLSEKDENENCKADISYEDEIMRTDPLIGMENVSPYD
FMTNS

Nucleotide

• Length: 2418 bp

>NTDB_id=873002 RCG20_RS06230 WP_308183371.1 1201680..1204097(-) (recD2) [Neobacillus sp. PS3-40]
ATGAACCAACAGGACTCAATGGATTTATTTGCTGAGCAAGGGAAATTTGTAAAAGGAAAACATCTTGTTACAATTTTTCA
TAATAACGAAAACTTTTATTCGGTATTAAGAATTCGTGTAGAAGAAACAAATGATAAATATGAGGATAAAGAAGCTGTTA
TAACTGGTTATTTTCCAAAAATTCATGAGCAAGAAACGTACGTCTTTTTCGGTGAATTTAAAGATCATCCGAAGTTTGGA
ATGCAATTTCAAGCTAATCATTTTCGCAAAGATATTCCGCAAACTAAGCAAGGAGTTGCGGCATACTTATCAAGTGAAAT
GTTTAAAGGAATTGGGAAAAAAACAGCGGAAAAAATTGTTGAGACTCTTGGCGAAAATGCCATATCGAAAATTCTTAATC
AACCTTCCCTACTTGATTCTGTTCCCAAGCTTCCTCCAGAAAAAGCAAAAATGCTCTATGATACATTAATGGAGCATCAA
GGGCTTGAACAAGTGATGGTTGCATTAAACCAATATGGCTTTGGACCACAACTTTCAATGCGAATTTATCAAGCTTATAA
AGAAGAAACACTAGACATCATTCAGAAAAACCCTTATCAACTAGTGGAAGATATTGAAGGGATCGGATTTGGACGGGCAG
ACGAACTTGGTTTTCAGCTTGGGATTTCTGGAAGCCATTCTGACCGAATTAAAGCAGCATGTCTGTATACACTTGAAAGT
GAAAGTATGCAAAGTGGACATGTTTACTTGGACACAAAAGATTTATTGGAAAAAGTTCAACAGTTACTTGAAGAAAATAA
GCGAGACAAAATCGAATTTCTTGATATTTCAAATGAGATCATCAAGGTTGGTGAAGAAGGCAAGCTTGTAGTCGAAGAAC
AGCGTATTTATTTGCCATCCTTGTATTATGCTGAAAAAGGCCTTGTGACAAACATTGATCGGATCTTAGAGAAAACTGAA
TATGTGGAACAATTCCCAGAGTCCGAGTTTTTACTCGCCTTAGGGAATTTAGAAGAACGATTAGGTGTTCAGTACGCCCC
GACGCAAAAAGATGCCATTCAAACAGCATTAATGTCGCCAATGCTCATTTTAACAGGTGGTCCAGGAACTGGGAAAACAA
CGGTCATAAAAGGTATTGTAGAACTATACGCAGAATTGCATGGCTGTTCGTTAGAACCAAAGGAGTACCATAAAAAAAAC
GAGGCATTTCCAATATTACTTTGTGCACCAACGGGTAGAGCGGCGAAGCGGATGAGTGAATCGACAGGACTCCCTGCTGT
TACGATTCACCGGTTACTTGGATTTAACGGATCTGCTGGCTTTGACAATGATGATGCAAACACGCTTGAAGGAAAAATAA
TTATTGTAGATGAAAGCTCCATGGTCGATATTTGGCTTGCCAATCAGTTATTCAAGGCCCTACCTGAAAATATTCAAGTT
ATCCTTGTTGGTGATGAAGACCAATTGCCTTCAGTCGGCCCTGGGCAAGTTTTGAAAGATTTATTAAAATCAGACCGGAT
TCCGACGGTAAGGCTTACGGATATTTATCGGCAGGCGGAAGGCTCCTCCATTATCAAGCTTGCCCATGAAATTAAAAGGG
GAACTTTGCCAGCAGATATCTCTGTCCAACAGACCGACCGTTCGTTTATAAAGTGCTCCTCAGCACAGCTTGCCCAGGTT
GTTGAAAAGGTAGCTCTTAATGCCAAGAATAAAGGGTATTCAGCTAAGAATATCCAAGTGTTAGCCCCGATGTACAAGGG
TCCTGCAGGGATTGATCGCTTAAATGTTTTACTGCAGGAAATTTTTAACCCAAATCCTGATGGAACAAGAAAAGAGATAT
CTTTTGGAGATGTAAAATACCGGATAGGGGATAAGGTACTACAACTGGTTAATCAACCGGAGAGTAATGTCTTTAATGGT
GATATCGGTGAAATTGTTTCCATTTTTTATAGTCGGGAAAATATAGAAAAACAGGATATGGTTATCATATCGTTTGAAGG
TACAGAAGTTACGTACACACGTCAAGACTTAAATCAAATTACGCATGCCTATTGTTGTTCAGTACATAAATCGCAAGGAA
GCGAATTTCCGATCGTCATTCTACCTGTGTCGCGAAGCTACTATCGTATGTTAAGAAGAAATTTAATTTATACAGCGATA
ACAAGAAGTAAACAATTTCTTATTTTATGTGGGGAAGAGGAAGCACTTCGTATTGGAGTAGAAAGAGCAGATGAGGAAAA
AAGACAGACAACTTTATGTGAAAAGCTTCAAAATGCGATCACTGTCAAACCGTTAAGTGAGAAAGATGAAAATGAAAATT
GCAAAGCAGATATTTCCTATGAAGACGAAATTATGAGGACTGACCCACTTATAGGAATGGAAAACGTTTCCCCTTATGAT
TTTATGACAAATAGCTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-663)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.723	99.627	0.605