Detailed information NTG0086962

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: K6J99_RS14660
• Genome accession: NZ_AP024623
• Coordinates: 2774885..2777281 (-)
• Length: 798 a.a.
• NCBI ID: WP_004398511.1
• Uniprot ID: A0AAE2VFP8
• Organism: Bacillus subtilis strain BEST3102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2769885..2782281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J99_RS14625 (BsBEST3102_28060)	glnQ	2770957..2771685 (+)	729	WP_003246180.1	amino acid ABC transporter ATP-binding protein	-
K6J99_RS14630 (BsBEST3102_28070)	glnH	2771707..2772528 (+)	822	WP_003245954.1	glutamine ABC transporter substrate-binding protein GlnH	-
K6J99_RS14635 (BsBEST3102_28080)	glnM	2772589..2773239 (+)	651	WP_004398664.1	amino acid ABC transporter permease	-
K6J99_RS14640 (BsBEST3102_28090)	glnP	2773256..2773912 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
K6J99_RS14645 (BsBEST3102_28100)	yrzQ	2773947..2774078 (-)	132	WP_003229780.1	YrzQ family protein	-
K6J99_RS14650 (BsBEST3102_28110)	-	2774100..2774291 (-)	192	WP_003225893.1	hypothetical protein	-
K6J99_RS14655	yrrD	2774303..2774827 (-)	525	WP_010886583.1	PRC-barrel domain-containing protein	-
K6J99_RS14660 (BsBEST3102_28130)	recD2	2774885..2777281 (-)	2397	WP_004398511.1	ATP-dependent RecD-like DNA helicase	Machinery gene
K6J99_RS14665 (BsBEST3102_28140)	yrrB	2777306..2777926 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
K6J99_RS14670 (BsBEST3102_28150)	mnmA	2778012..2779127 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
K6J99_RS14675 (BsBEST3102_28160)	iscSA	2779158..2780297 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
K6J99_RS14680 (BsBEST3102_28170)	cymR	2780316..2780732 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
K6J99_RS14685 (BsBEST3102_28180)	rarA	2780935..2782200 (+)	1266	WP_004398500.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89183.74 Da
• Isoelectric Point: 5.0291

>NTDB_id=86962 K6J99_RS14660 WP_004398511.1 2774885..2777281(-) (recD2) [Bacillus subtilis strain BEST3102]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMDVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=86962 K6J99_RS14660 WP_004398511.1 2774885..2777281(-) (recD2) [Bacillus subtilis strain BEST3102]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCAGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATCGACACTCAATCACTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATTACAGAAATGGATGCCGCTAACGCAATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCTTCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGGACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGCCCGGGAACAGGAAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
TACGATACACAGGCTGCTTGGCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGCCAGGCAGAAGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	100	100	1