Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   Q8X41_RS03750 Genome accession   NZ_CP132291
Coordinates   771873..773747 (+) Length   624 a.a.
NCBI ID   WP_397538922.1    Uniprot ID   -
Organism   Rummeliibacillus pycnus strain X33     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 766873..778747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q8X41_RS03740 - 767610..769280 (+) 1671 WP_397538920.1 P-loop domain-containing protein -
  Q8X41_RS03745 - 769630..771876 (+) 2247 WP_397538921.1 ABC transporter ATP-binding protein -
  Q8X41_RS03750 rcrQ 771873..773747 (+) 1875 WP_397538922.1 ABC transporter ATP-binding protein Regulator
  Q8X41_RS03755 - 774231..774770 (-) 540 WP_397538923.1 helicase -
  Q8X41_RS03760 - 775334..775855 (-) 522 WP_397538924.1 GNAT family N-acetyltransferase -
  Q8X41_RS03765 - 776109..777026 (-) 918 WP_397538925.1 serine hydrolase domain-containing protein -
  Q8X41_RS03770 - 777826..778050 (-) 225 WP_102691684.1 hypothetical protein -

Sequence

Protein


Download         Length: 624 a.a.        Molecular weight: 69149.23 Da        Isoelectric Point: 7.5972

>NTDB_id=867998 Q8X41_RS03750 WP_397538922.1 771873..773747(+) (rcrQ) [Rummeliibacillus pycnus strain X33]
MSDRKIENRRQSGPGPGGGGHMGGGMRKIEKAKNFKGTMNKLLQYLKPYKLSILVVILFAIGSAAFTIVGPKILGKATTK
LFEGLVSKVSGAAGAAIDFTYIGNIVILLLGLYILSAAFGIIQGYIISGVAQKVSYNFRKEIDEKINRMPLKYFDKTTHG
EVLSRITNDVDTVSQTLNQSMSQIITSVITIIGVLIMMLSISWQMTLVALLILPVSMILIMGVVKRSQKYFKSQQEYLGH
VNGQVEEIYSGHNIVKAFNKEEEEVKKFEELNDTLYHSAWKSQFLSGMMMPIMTFIGNIGYVAVSILGGWLAVKRTIAVG
DILAFVQYVRSFTQPIAQVAQIANVLQSTAAAAERVFEFLDEEEEVPESEYPVKLQKVQGEVTFKDVQFGYNPDKIIINN
FSANIKPGQKVAIVGPTGAGKTTIVKLLMRFYDVNSGAICIDGHDIKDFTREDLRNMFGMVLQDTWLFNGSIMENIRYGR
LDATDEEVIEAAKAAHVHNFVKTLPNKYQMELNEEASNVSQGQKQLLTIARALLADPKILILDEATSSIDTRTEVLIQKA
MKNLMEGRTSFIIAHRLSTIRDADLILVMKDGDIVEQGNHKELLKADGFYASLYNSQFEGADAS

Nucleotide


Download         Length: 1875 bp        

>NTDB_id=867998 Q8X41_RS03750 WP_397538922.1 771873..773747(+) (rcrQ) [Rummeliibacillus pycnus strain X33]
ATGAGTGATAGAAAAATAGAAAATAGAAGACAAAGCGGCCCTGGTCCTGGTGGCGGTGGTCATATGGGCGGTGGCATGAG
AAAGATTGAGAAGGCAAAAAACTTCAAAGGAACGATGAATAAACTCCTTCAATACTTGAAGCCCTATAAATTATCAATCT
TAGTCGTTATCCTTTTCGCAATCGGTAGTGCAGCCTTTACAATTGTTGGTCCAAAAATTTTAGGAAAAGCGACAACAAAA
CTTTTCGAAGGACTTGTAAGCAAAGTATCAGGAGCAGCAGGTGCGGCCATTGACTTTACCTATATCGGAAACATTGTCAT
TTTACTCCTTGGATTATATATACTGAGCGCTGCATTTGGTATTATCCAGGGGTACATTATTTCTGGAGTAGCCCAAAAAG
TATCTTATAACTTCAGAAAAGAAATCGATGAAAAAATTAACCGGATGCCGCTTAAGTACTTTGATAAAACAACGCACGGA
GAAGTATTATCAAGAATTACGAATGACGTAGATACGGTGAGTCAAACTTTAAACCAAAGTATGTCGCAAATCATCACATC
CGTTATTACAATCATCGGTGTACTTATTATGATGTTATCAATCAGCTGGCAAATGACATTAGTTGCGCTATTAATATTGC
CAGTATCCATGATTCTTATCATGGGAGTCGTAAAGAGATCACAAAAATACTTCAAATCTCAGCAAGAATATTTAGGACAC
GTAAACGGACAGGTCGAAGAAATTTATAGTGGTCACAATATCGTAAAAGCTTTTAACAAAGAAGAAGAAGAAGTAAAAAA
ATTCGAAGAGTTAAATGATACCCTTTACCACTCCGCATGGAAATCTCAATTTTTATCTGGAATGATGATGCCCATTATGA
CATTTATCGGTAATATTGGTTATGTCGCTGTGTCTATTTTAGGCGGATGGCTTGCTGTTAAGAGAACCATCGCAGTTGGA
GACATTTTAGCCTTTGTGCAATATGTTAGAAGCTTTACGCAACCAATCGCTCAAGTAGCGCAAATCGCAAACGTACTTCA
ATCCACTGCAGCTGCTGCTGAAAGAGTCTTCGAATTTTTGGATGAAGAAGAGGAAGTGCCAGAATCAGAATATCCAGTGA
AGCTGCAAAAAGTTCAAGGAGAAGTTACCTTCAAAGATGTTCAATTTGGATACAATCCAGATAAGATCATCATCAATAAT
TTCTCAGCTAACATTAAGCCTGGACAAAAAGTAGCGATAGTCGGACCAACCGGAGCTGGTAAAACAACGATCGTAAAACT
ATTAATGCGTTTCTATGACGTAAACAGCGGTGCAATATGTATCGACGGTCACGATATAAAAGACTTCACGCGAGAAGACC
TGCGCAACATGTTTGGTATGGTACTTCAAGACACTTGGCTATTTAACGGTTCCATCATGGAAAATATACGTTACGGTAGA
CTGGATGCTACAGACGAAGAAGTAATTGAAGCAGCGAAAGCAGCTCACGTTCACAACTTCGTAAAAACATTACCAAATAA
ATATCAAATGGAACTAAACGAAGAAGCAAGCAACGTATCCCAAGGGCAGAAGCAACTACTAACAATTGCCCGCGCCCTAC
TAGCGGATCCGAAAATATTAATACTCGATGAAGCAACAAGCTCCATTGACACTCGTACAGAAGTGCTGATTCAAAAAGCG
ATGAAAAACCTTATGGAAGGTAGAACAAGCTTTATTATCGCTCATAGATTATCAACAATACGTGATGCAGATTTAATCCT
TGTCATGAAAGATGGGGATATTGTAGAACAAGGTAATCATAAAGAGTTATTAAAAGCTGATGGTTTCTATGCTTCGCTTT
ATAATAGTCAGTTCGAAGGTGCGGATGCTTCGTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-335)

ABC transporter (ABC_tran)

(399-547)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

52.316

93.429

0.489