Detailed information NTG0866485

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q8W10_RS08285
• Genome accession: NZ_CP131950
• Coordinates: 1729220..1729921 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2023CK-00127
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1724220..1734921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q8W10_RS08250 (Q8W10_08260)	kdsB	1724743..1725504 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Q8W10_RS08255 (Q8W10_08265)	-	1725516..1726496 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Q8W10_RS08260 (Q8W10_08270)	-	1726508..1726849 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
Q8W10_RS08265 (Q8W10_08275)	-	1726867..1727640 (+)	774	WP_000497298.1	TatD family hydrolase	-
Q8W10_RS08270 (Q8W10_08280)	-	1727678..1728286 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Q8W10_RS08275 (Q8W10_08285)	-	1728296..1728850 (+)	555	WP_000841373.1	type II secretion system protein	-
Q8W10_RS08280 (Q8W10_08290)	xcpV	1728840..1729220 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q8W10_RS08285 (Q8W10_08295)	xcpW	1729220..1729921 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q8W10_RS08290 (Q8W10_08300)	gspK	1729921..1730880 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Q8W10_RS08295 (Q8W10_08305)	-	1731111..1731707 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
Q8W10_RS08300 (Q8W10_08310)	ung	1731758..1732471 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
Q8W10_RS08305 (Q8W10_08315)	-	1732468..1733592 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Q8W10_RS08310 (Q8W10_08320)	tadA	1733599..1734102 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Q8W10_RS08315 (Q8W10_08325)	-	1734172..1734615 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=866485 Q8W10_RS08285 WP_000594589.1 1729220..1729921(+) (xcpW) [Acinetobacter baumannii strain 2023CK-00127]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=866485 Q8W10_RS08285 WP_000594589.1 1729220..1729921(+) (xcpW) [Acinetobacter baumannii strain 2023CK-00127]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996