Detailed information NTG0865998

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q7566_RS08985
• Genome accession: NZ_CP131901
• Coordinates: 1833109..1833810 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2010C01-165
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1828109..1838810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7566_RS08950 (Q7566_08950)	kdsB	1828632..1829393 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Q7566_RS08955 (Q7566_08955)	-	1829405..1830385 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Q7566_RS08960 (Q7566_08960)	-	1830397..1830738 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
Q7566_RS08965 (Q7566_08965)	-	1830756..1831529 (+)	774	WP_000497298.1	TatD family hydrolase	-
Q7566_RS08970 (Q7566_08970)	-	1831567..1832175 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Q7566_RS08975 (Q7566_08975)	-	1832185..1832739 (+)	555	WP_000841373.1	type II secretion system protein	-
Q7566_RS08980 (Q7566_08980)	xcpV	1832729..1833109 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q7566_RS08985 (Q7566_08985)	xcpW	1833109..1833810 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q7566_RS08990 (Q7566_08990)	gspK	1833810..1834769 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Q7566_RS08995 (Q7566_08995)	-	1835000..1835596 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
Q7566_RS09000 (Q7566_09000)	ung	1835647..1836360 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
Q7566_RS09005 (Q7566_09005)	-	1836357..1837481 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Q7566_RS09010 (Q7566_09010)	tadA	1837488..1837991 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Q7566_RS09015 (Q7566_09015)	-	1838061..1838504 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=865998 Q7566_RS08985 WP_000594589.1 1833109..1833810(+) (xcpW) [Acinetobacter baumannii strain 2010C01-165]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=865998 Q7566_RS08985 WP_000594589.1 1833109..1833810(+) (xcpW) [Acinetobacter baumannii strain 2010C01-165]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996