Detailed information NTG0865856

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q7569_RS08790
• Genome accession: NZ_CP131893
• Coordinates: 1849273..1849974 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2008C02-166
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1844273..1854974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7569_RS08755 (Q7569_08785)	kdsB	1844796..1845557 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Q7569_RS08760 (Q7569_08790)	-	1845569..1846549 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Q7569_RS08765 (Q7569_08795)	-	1846561..1846902 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
Q7569_RS08770 (Q7569_08800)	-	1846920..1847693 (+)	774	WP_000497298.1	TatD family hydrolase	-
Q7569_RS08775 (Q7569_08805)	-	1847731..1848339 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Q7569_RS08780 (Q7569_08810)	-	1848349..1848903 (+)	555	WP_000841373.1	type II secretion system protein	-
Q7569_RS08785 (Q7569_08815)	xcpV	1848893..1849273 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q7569_RS08790 (Q7569_08820)	xcpW	1849273..1849974 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q7569_RS08795 (Q7569_08825)	gspK	1849974..1850933 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Q7569_RS08800 (Q7569_08830)	-	1851164..1851760 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
Q7569_RS08805 (Q7569_08835)	ung	1851811..1852524 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
Q7569_RS08810 (Q7569_08840)	-	1852521..1853645 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Q7569_RS08815 (Q7569_08845)	tadA	1853652..1854155 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Q7569_RS08820 (Q7569_08850)	-	1854225..1854668 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=865856 Q7569_RS08790 WP_000594589.1 1849273..1849974(+) (xcpW) [Acinetobacter baumannii strain 2008C02-166]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=865856 Q7569_RS08790 WP_000594589.1 1849273..1849974(+) (xcpW) [Acinetobacter baumannii strain 2008C02-166]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996