Detailed information NTG0865805

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q7570_RS10325
• Genome accession: NZ_CP131889
• Coordinates: 2173977..2174678 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2006S08-082
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2168977..2179678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7570_RS10295 (Q7570_10335)	-	2169283..2169726 (-)	444	WP_001246675.1	SRPBCC family protein	-
Q7570_RS10300 (Q7570_10340)	tadA	2169796..2170299 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Q7570_RS10305 (Q7570_10345)	-	2170306..2171430 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Q7570_RS10310 (Q7570_10350)	ung	2171427..2172140 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Q7570_RS10315 (Q7570_10355)	-	2172191..2172787 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
Q7570_RS10320 (Q7570_10360)	gspK	2173018..2173977 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Q7570_RS10325 (Q7570_10365)	xcpW	2173977..2174678 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q7570_RS10330 (Q7570_10370)	xcpV	2174678..2175058 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q7570_RS10335 (Q7570_10375)	-	2175048..2175602 (-)	555	WP_000841373.1	type II secretion system protein	-
Q7570_RS10340 (Q7570_10380)	-	2175612..2176220 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Q7570_RS10345 (Q7570_10385)	-	2176258..2177031 (-)	774	WP_000497298.1	TatD family hydrolase	-
Q7570_RS10350 (Q7570_10390)	-	2177049..2177390 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Q7570_RS10355 (Q7570_10395)	-	2177402..2178382 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Q7570_RS10360 (Q7570_10400)	kdsB	2178394..2179155 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=865805 Q7570_RS10325 WP_000594589.1 2173977..2174678(-) (xcpW) [Acinetobacter baumannii strain 2006S08-082]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=865805 Q7570_RS10325 WP_000594589.1 2173977..2174678(-) (xcpW) [Acinetobacter baumannii strain 2006S08-082]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996