Detailed information NTG0865676

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q7573_RS10175
• Genome accession: NZ_CP131873
• Coordinates: 2143854..2144669 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain 2014S07-126
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2138854..2149669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7573_RS10145 (Q7573_10190)	-	2139162..2139602 (-)	441	WP_002121449.1	SRPBCC family protein	-
Q7573_RS10150 (Q7573_10195)	tadA	2139673..2140176 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
Q7573_RS10155 (Q7573_10200)	hibch	2140182..2141306 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
Q7573_RS10160 (Q7573_10205)	ung	2141303..2142016 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
Q7573_RS10165 (Q7573_10210)	-	2142070..2142666 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
Q7573_RS10170 (Q7573_10215)	gspK	2142894..2143853 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
Q7573_RS10175 (Q7573_10220)	xcpW	2143854..2144669 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q7573_RS10180 (Q7573_10225)	xcpV	2144669..2145049 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q7573_RS10185 (Q7573_10230)	-	2145039..2145593 (-)	555	WP_002121405.1	type II secretion system protein	-
Q7573_RS10190 (Q7573_10235)	-	2145600..2146208 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
Q7573_RS10195 (Q7573_10240)	ycfH	2146245..2147018 (-)	774	WP_002121462.1	TatD family hydrolase	-
Q7573_RS10200 (Q7573_10245)	pilZ	2147036..2147377 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
Q7573_RS10205 (Q7573_10250)	holB	2147388..2148368 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
Q7573_RS10210 (Q7573_10255)	kdsB	2148382..2149143 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=865676 Q7573_RS10175 WP_002121460.1 2143854..2144669(-) (xcpW) [Acinetobacter pittii strain 2014S07-126]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=865676 Q7573_RS10175 WP_002121460.1 2143854..2144669(-) (xcpW) [Acinetobacter pittii strain 2014S07-126]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738