Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   Q7623_RS09415 Genome accession   NZ_CP131710
Coordinates   1811408..1812439 (-) Length   343 a.a.
NCBI ID   WP_341948181.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 2014S11-203     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1806408..1817439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7623_RS09365 (Q7623_09330) - 1806545..1807306 (-) 762 WP_001107758.1 SDR family NAD(P)-dependent oxidoreductase -
  Q7623_RS09370 (Q7623_09335) ytpR 1807348..1807974 (-) 627 WP_000578289.1 YtpR family tRNA-binding protein -
  Q7623_RS09375 (Q7623_09340) - 1807990..1808307 (-) 318 WP_000615769.1 thioredoxin family protein -
  Q7623_RS09380 (Q7623_09345) - 1808304..1808603 (-) 300 WP_341948122.1 DUF4651 domain-containing protein -
  Q7623_RS09385 (Q7623_09350) - 1808801..1808881 (-) 81 WP_223842529.1 hypothetical protein -
  Q7623_RS09390 (Q7623_09355) - 1808888..1809079 (-) 192 WP_000291826.1 cell wall-binding protein -
  Q7623_RS09395 (Q7623_09360) - 1809240..1809914 (-) 675 WP_000725750.1 membrane protein -
  Q7623_RS09400 (Q7623_09365) - 1809920..1810366 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  Q7623_RS09405 (Q7623_09370) - 1810480..1810983 (-) 504 WP_000800942.1 phosphatase PAP2 family protein -
  Q7623_RS09410 (Q7623_09375) - 1810980..1811342 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  Q7623_RS09415 (Q7623_09380) rcrQ 1811408..1812439 (-) 1032 WP_341948181.1 ATP-binding cassette domain-containing protein Regulator
  Q7623_RS09420 (Q7623_09385) rcrP 1812446..1813267 (-) 822 WP_000601682.1 ABC transporter permease Regulator
  Q7623_RS09425 (Q7623_09390) - 1813283..1813753 (-) 471 WP_341948182.1 MarR family winged helix-turn-helix transcriptional regulator -
  Q7623_RS09430 (Q7623_09395) - 1813877..1814593 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  Q7623_RS09435 (Q7623_09400) ply 1815474..1816889 (-) 1416 WP_001284363.1 cholesterol-dependent cytolysin pneumolysin -
  Q7623_RS09440 (Q7623_09405) - 1816900..1817310 (-) 411 WP_000595757.1 hypothetical protein -

Sequence

Protein


Download         Length: 343 a.a.        Molecular weight: 38036.30 Da        Isoelectric Point: 4.5262

>NTDB_id=864133 Q7623_RS09415 WP_341948181.1 1811408..1812439(-) (rcrQ) [Streptococcus pneumoniae strain 2014S11-203]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKRSIRI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=864133 Q7623_RS09415 WP_341948181.1 1811408..1812439(-) (rcrQ) [Streptococcus pneumoniae strain 2014S11-203]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTACAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGACAGCTCATGCTGGTCAAAAGGTTGCCATTGTTG
GGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGAGAAGTATTCGCATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(120-265)

ABC transporter (ABC_tran)

(68-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.357

65.306

0.525
  rcrP Streptococcus mutans UA159

37.861

100

0.382