Detailed information NTG0863608

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: WGK59_RS06185
• Genome accession: NZ_CP148002
• Coordinates: 1244756..1246096 (+)
• Length: 446 a.a.
• NCBI ID: WP_015702417.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain AR2427
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1239756..1251096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WGK59_RS06170 (WGK59_06170)	lrp	1240811..1241290 (+)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-
WGK59_RS06175 (WGK59_06175)	-	1241292..1244060 (+)	2769	WP_015702419.1	DNA translocase FtsK	-
WGK59_RS06180 (WGK59_06180)	lolA	1244078..1244695 (+)	618	WP_015702418.1	outer membrane lipoprotein chaperone LolA	-
WGK59_RS06185 (WGK59_06185)	rarA	1244756..1246096 (+)	1341	WP_015702417.1	replication-associated recombination protein A	Machinery gene
WGK59_RS06190 (WGK59_06190)	aroA	1246178..1247476 (-)	1299	WP_015702416.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
WGK59_RS06195 (WGK59_06195)	purU	1247476..1248312 (-)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-
WGK59_RS06200 (WGK59_06200)	-	1248382..1248786 (-)	405	WP_015702415.1	H-NS family nucleoid-associated regulatory protein	-
WGK59_RS06205 (WGK59_06205)	-	1249229..1250749 (+)	1521	WP_015702414.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50219.01 Da
• Isoelectric Point: 6.3316

>NTDB_id=863608 WGK59_RS06185 WP_015702417.1 1244756..1246096(+) (rarA) [Haemophilus influenzae strain AR2427]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELVVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLSVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=863608 WGK59_RS06185 WP_015702417.1 1244756..1246096(+) (rarA) [Haemophilus influenzae strain AR2427]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCGATTCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGACCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCCATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAGTGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGCGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGCGAGCCATCGCCCAAGCCATTATCTATCTTTCGGTAGCACCAAAAAGTAATGC
CGTTTATACGGCGTTTAACACAGCAAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCAACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372